DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Hand and twist2

DIOPT Version :10

Sequence 1:NP_609370.2 Gene:Hand / 34379 FlyBaseID:FBgn0032209 Length:174 Species:Drosophila melanogaster
Sequence 2:NP_001096679.1 Gene:twist2 / 100125350 XenbaseID:XB-GENE-5878700 Length:162 Species:Xenopus tropicalis


Alignment Length:90 Identity:43/90 - (47%)
Similarity:56/90 - (62%) Gaps:16/90 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 GYVPTS-----NTR---------IVKKRNTANKKERRRTQSINNAFSYLREKIPNVPTDTKLSKI 97
            |.||.|     |.|         :..:|..||.:||:||||:|:||:.||:.||.:|:| |||||
 Frog    43 GRVPLSPPCKRNKRSPHIETFEDVHTQRIIANVRERQRTQSLNDAFAELRKIIPTLPSD-KLSKI 106

  Fly    98 KTLKLAILYINYLVNVLDGD-LDPK 121
            :|||||..||::|..||..| ||.|
 Frog   107 QTLKLASRYIDFLYQVLQSDELDHK 131

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HandNP_609370.2 bHLH_TS_HAND 59..114 CDD:381472 31/54 (57%)
twist2NP_001096679.1 bHLH_SF 61..134 CDD:469605 37/72 (51%)

Return to query results.
Submit another query.