DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hand and si:ch211-246m6.4

DIOPT Version :9

Sequence 1:NP_609370.2 Gene:Hand / 34379 FlyBaseID:FBgn0032209 Length:174 Species:Drosophila melanogaster
Sequence 2:XP_001340709.1 Gene:si:ch211-246m6.4 / 100000527 ZFINID:ZDB-GENE-050208-498 Length:193 Species:Danio rerio


Alignment Length:103 Identity:44/103 - (42%)
Similarity:57/103 - (55%) Gaps:15/103 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 IVKKRNTANKKERRRTQSINNAFSYLREKIPNVPTDTKLSKIKTLKLAILYINYLVNVLDGDLDP 120
            :.|:|..||.:||.||.|:|.||:.||..||..|.|.|||||:||:||..||::|.|||....|.
Zfish    81 VSKQRQAANARERDRTHSVNTAFTSLRTLIPTEPADRKLSKIETLRLASSYISHLANVLLLGEDC 145

  Fly   121 KGG-----------FRAELK-PVSRKICSEKKHCLKSE 146
            :.|           ..|.|| |..|.||:   .||.::
Zfish   146 RDGQPCLKYHNILQSNANLKSPPVRPICT---FCLSNQ 180

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HandNP_609370.2 HLH 59..110 CDD:278439 28/50 (56%)
si:ch211-246m6.4XP_001340709.1 HLH 84..135 CDD:278439 28/50 (56%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170583783
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4029
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.740

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