DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ufd4 and UBE3B

DIOPT Version :9

Sequence 1:NP_609369.1 Gene:Ufd4 / 34378 FlyBaseID:FBgn0032208 Length:2727 Species:Drosophila melanogaster
Sequence 2:NP_569733.2 Gene:UBE3B / 89910 HGNCID:13478 Length:1068 Species:Homo sapiens


Alignment Length:1106 Identity:204/1106 - (18%)
Similarity:374/1106 - (33%) Gaps:328/1106 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly  1762 EVPSTSEVAT-HTGLLETFAAIARRRTSQGTNIQDNQIMNAEANVNEHGDQNASGSFLGHSVTSL 1825
            |:...|.:.| :..:|.||...:..:..:|........||       |...|..|....|...|:
Human   151 EILQDSRLITLYLTMLVTFTDTSTWKILRGKGESLRPAMN-------HICANIMGHLNQHGFYSV 208

  Fly  1826 VKLALSSN-------FHSGLLSTAQSY---PSLSSNNSENI----------APSNPSNTSAGQQS 1870
            :::.|:..       ...|.|:.|.|.   |.:::..|:|:          .|:..::.|.....
Human   209 LQILLTRGLARPRPCLSKGTLTAAFSLALRPVIAAQFSDNLIRPFLIHIMSVPALVTHLSTVTPE 273

  Fly  1871 ASTI--NHTLTMSLTSTSSDSEQV-SLEDFLESCRAPALLGDLDDEDDMDEDNDEEENEDEYEEV 1932
            ..|:  :|.:.........|.::. .:.:.||.|....|:|:|.....:.....|||.:.....:
Human   274 RLTVLESHDMLRKFIIFLRDQDRCRDVCESLEGCHTLCLMGNLLHLGSLSPRVLEEETDGFVSLL 338

  Fly  1933 GNTLL----QVMVSRNLLTFMD----------DEAMENRLVGVTKRKSWDDEFVLKRQF------ 1977
            ..||.    .|...::.||...          |..:...:..:||:..:.....|.|.|      
Human   339 TQTLCYCRKYVSQKKSNLTHWHPVLGWFSQSVDYGLNESMHLITKQLQFLWGVPLIRIFFCDILS 403

  Fly  1978 SALIPAFDPRPGRTNVNQTSDLEISPLGAELPKP-QQSGGPETIEQPLLGLKLRGPGIGGIPEVE 2041
            ..|:.:.:|    .:....|...:.|:.:.|.:. |:|.....|.:|:.|.::....:..:..:.
Human   404 KKLLESQEP----AHAQPASPQNVLPVKSLLKRAFQKSASVRNILRPVGGKRVDSAEVQKVCNIC 464

  Fly  2042 I--DLSNTDWTIFRAVQELLQCSQLNKLDKFRKIWEPTYTIVYREVSPEAQESTCLESEEFPQTP 2104
            :  ..|.|..|..| :|.|...:.|:  |...|:|                              
Human   465 VLYQTSLTTLTQIR-LQILTGLTYLD--DLLPKLW------------------------------ 496

  Fly  2105 DVSSKSGASTLSPNSPMHIGFNVADNNLCSVDDVLELLTQINGLNQSEI----DSDVKEHGVSVL 2165
                 :....|.|:..:.:.....:|:......:|.:|......::..|    |.:|.|..:|..
Human   497 -----AFICELGPHGGLKLFLECLNNDTEESKQLLAMLMLFCDCSRHLITILDDIEVYEEQISFK 556

  Fly  2166 SEDL---------FISKKITNKLQQQIQDPLVLASNALPNW--------CEN------------- 2200
            .|:|         |:.|.|.:.:.:..:...:....::..|        |..             
Human   557 LEELVTISSFLNSFVFKMIWDGIVENAKGETLELFQSVHGWLMVLYERDCRRRFTPEDHWLRKDL 621

  Fly  2201 ------------------LNQSCPFLFPFETRQLYFNCTSFGASRSIVCLQSQRDVTVERQRIPI 2247
                              :.|..|.:.|.:.|.|.|...                ||.|::::.:
Human   622 KPSVLFQELDRDRKRAQLILQYIPHVIPHKNRVLLFRTM----------------VTKEKEKLGL 670

  Fly  2248 M-----SPRRDDHEFRIGRLKHERVKVPRNEDLLMWAMQVMKTHCNRKSVLEVEFLDEEG---TG 2304
            :     ||    |...| .::..|:.....|.|...:...|      |.|:.|:|:::.|   .|
Human   671 VETSSASP----HVTHI-TIRRSRMLEDGYEQLRQLSQHAM------KGVIRVKFVNDLGVDEAG 724

  Fly  2305 LGPTLEFYALVAAEIQRSDLCMWLCDDDLGEDTENSTQSAEGNSKPVGYYVNRREHGIFPAPLPQ 2369
            :.....|...:...|:|      :.|..|     |..::..|:.:            ::|:|   
Human   725 IDQDGVFKEFLEEIIKR------VFDPAL-----NLFKTTSGDER------------LYPSP--- 763

  Fly  2370 NSEICENVLKYFWFFGVFVAKVLQDMRLVDIPLSTSFLQLLC--HNKVLSRNLQKVISDRRNGDL 2432
            .|.|.||.|:.|.|.|..:.|.:.:..:||:|.::.||..|.  |:.|...::.:          
Human   764 TSYIHENYLQLFEFVGKMLGKAVYEGIVVDVPFASFFLSQLLGHHHSVFYSSVDE---------- 818

  Fly  2433 SVVSEDSDIVETCTKLLRTDSNKSNAFGGILSLENLKEIDPTRYQFLQEMQNLLLRKQSIEFDDT 2497
             :.|.||:..:..|.:.|.|.:                                           
Human   819 -LPSLDSEFYKNLTSIKRYDGD------------------------------------------- 839

  Fly  2498 ISAEKKHELINELKLQTQNGLEVSLEDLALTFTYLPSSSIYGYTQA-ELLPNGSSVNVTIDNLEA 2561
                                    :.||.||.:|  ...:.|.... ||:|.|.::.||.:|..:
Human   840 ------------------------ITDLGLTLSY--DEDVMGQLVCHELIPGGKTIPVTNENKIS 878

  Fly  2562 YCELLMNFILQDGIAQQMKAFSDGFNEVFPLKKLAAFTPSEARMMICGEQFPHWSREDIISYTEP 2626
            |..|:.:|.:...|..|..|...||..:...:.:..|:..|.:.:|.|:. .....||:..:|..
Human   879 YIHLMAHFRMHTQIKNQTAALISGFRSIIKPEWIRMFSTPELQRLISGDN-AEIDLEDLKKHTVY 942

  Fly  2627 KLGYNKDSPGFQRFV----NVLLS-MSGDERKAFLQFTTGCSSLPPGGLANLHPRLTV------- 2679
            ..|::    |..|.:    ::|.| .:.|||..||:|.|.||..|..|.|.|.|..::       
Human   943 YGGFH----GSHRVIIWLWDILASDFTPDERAMFLKFVTSCSRPPLLGFAYLKPPFSIRCVEVSD 1003

  Fly  2680 -----------------VRKVDAGVGSYPSVNTCVHYLKLPDYPTEEIMKERLLTA-TKEKGFHL 2726
                             :||.:.| |..|:.:||.:.||||:|..:.:::|:|..| :...||.|
Human  1004 DQDTGDTLGSVLRGFFTIRKREPG-GRLPTSSTCFNLLKLPNYSKKSVLREKLRYAISMNTGFEL 1067

  Fly  2727 N 2727
            :
Human  1068 S 1068

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ufd4NP_609369.1 ANK repeat 393..420 CDD:293786
ANK 396..509 CDD:238125
ANK repeat 422..453 CDD:293786
ANK repeat 455..484 CDD:293786
F5_F8_type_C 1173..1298 CDD:329041
MIB_HERC2 1333..1389 CDD:310955
DamX 1576..>1725 CDD:330571
HECTc 2265..2725 CDD:238033 105/495 (21%)
UBE3BNP_569733.2 HECTc 682..1066 CDD:238033 106/502 (21%)
HECTc 707..1065 CDD:214523 100/469 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5021
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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