Sequence 1: | NP_609369.1 | Gene: | Ufd4 / 34378 | FlyBaseID: | FBgn0032208 | Length: | 2727 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_010745.3 | Gene: | TOM1 / 852068 | SGDID: | S000002865 | Length: | 3268 | Species: | Saccharomyces cerevisiae |
Alignment Length: | 2556 | Identity: | 475/2556 - (18%) |
---|---|---|---|
Similarity: | 847/2556 - (33%) | Gaps: | 769/2556 - (30%) |
- Green bases have known domain annotations that are detailed below.
Fly 458 LHYAACFGRPAIAKILLKFGAYPDLRDEDGKTPLDKARERLDDGHREVAAI----LQSPGEWMSP 518
Fly 519 DHSLLNKDGKKYTLMEPRGDPEMAPIY-------LKVLLPIFCRTFLGSMLGSVRRASLALIKKI 576
Fly 577 VQYAYPTVLQSLSETSFSEDAASTSGQNGGNLLIEVIASVLDN--EDDGDGHLIVLNIIEEIMCK 639
Fly 640 TQEEFLDHFARLGVFAKVQALMDTDAEELYVQL-PGTVEEPAAAQRSSTSVVVAPRPTSDDPMED 703
Fly 704 AKEILQGKPYHWREWSICRGRDCLYVWSDSVALELSNGSNGWFRFIIDGKLATMYS--------- 759
Fly 760 --SGSPEN-----GNDSSENRGEFLEK--LMRARSCV-----IAGVVSQPILPTASALRLVVGNW 810
Fly 811 VLQSQKTNQLQIHNTEGHQVTVLQDDLPGFIFESNRGTKHTFSAETVLGPDFASGWSTAKKKRNK 875
Fly 876 SKTEGQKFQVRNLSREIYNKYFKSAQIIPRGAVAILTDIVKQIELSFEEQHMAPNGNWETTLTDA 940
Fly 941 LMKLSQLIHEDGVVSAYEMHSSGLVQALVAVLSVNHWE--TNSPR---CKRNKMQKQRVSVFKKC 1000
Fly 1001 ILEDNVESATNKPRTKS-------TASILIQKLVSVLES-TEKLPVYLYDSPCT---GYSLQILQ 1054
Fly 1055 KRLRFRLERAECESTLFDRSGRTLKMEPLATIGQLSKYLLKMVAKQWYD---LDRSTYFYLKKIR 1116
Fly 1117 EHRTATVFTH-------SFDFDEEGLLFYIGSNAKTCDWVNPAQYGLVQVTSSEGKTLPYGKLED 1174
Fly 1175 ILSRDSISLNCHTKDNKKAWFAIDLGVYIIPTAYTLRHARGYGRSALRNWLLQGSKDGSTWTTLS 1239
Fly 1240 THVDDKSLVEPGSTATWPINCATDDSVWYRHIRIQQNGRNASGQTHYLSLSGFEIYGRVVGVADD 1304
Fly 1305 IGKSVKEAEAKTRRERRQIRAQLKHMTTGARVIRGVDWRWEEQDGCAEGTITG-EIHNGWIDVKW 1368
Fly 1369 DHGVRNSYRMGAEGK------------------YDLKLADCEYLSAFDGNQSMGSASTAAKPSEK 1415
Fly 1416 GG----NTLTSRKSSSTPSLPEATEKNQNPEGASNQTVSADNLAWKQTVETIAENVFASAKTQII 1476
Fly 1477 SNQLAMNTSSSREARAKHKESGTNQMHKDNISGPSPLSRELEHISDLSAIN----NSMPAINSSN 1537
Fly 1538 VSDLATISENLSLTELSKENICRVLTPSYKPAESVTASQSSSHPD---------VQSSSPRENDI 1593
Fly 1594 -------------KNISNIEENNKMNAN-------NSVNKIS----KDL-----LANLRTSNIAG 1629
Fly 1630 CPPVTQLSTEALEMIDKMRDGVDMIRN--MSNSILSTDTFPVPCT----NVPVGGKKTPKAQALI 1688
Fly 1689 NPDNANQKQIIVTSEEFPTKSSKKPSVTLKPAQQPNAVLSIVDIKEQPISNENV---SVPSQMSI 1750
Fly 1751 SVPNLTTTSASEVPSTSEVATHTGLLETFAAIARRRTSQGTNIQ----DNQIMNAEANVN---EH 1808
Fly 1809 GDQNASGS---------------FLGHS-VTSLVKLALSSN-------FHS---GLLSTAQSYPS 1847
Fly 1848 LSSN----NSENIAPSNPSNTSAGQQSASTINHTLTMSLTSTSSDSEQVSLEDFLESCRAPALLG 1908
Fly 1909 DLDDEDD-------MDEDN---DEEENEDEYEEVGNTLLQ-------VMVSRNLLTFMDDEAM-- 1954
Fly 1955 --------------------ENRLVGVTKR---KSWDDEFVLKRQFSALIPAFDPRPGRTNVNQT 1996
Fly 1997 SDLEISPLGAELPKPQQSGGPETIEQPLLGL------KLRGPGIGGIPEVEIDLSNTDWTIFRAV 2055
Fly 2056 Q---ELLQCSQLNKLD--KFRKIWEPTYTIVYREVSPEAQE---------------------STC 2094
Fly 2095 LESEEFPQTPDVSSKSGASTLSPNSPMHIGFNVADNNLCSVDDVLELLTQINGLNQSEIDSDVKE 2159
Fly 2160 HGVSVLS------EDLFI-----SKKITNKLQQQIQDPLVLASNALPNWCENLNQSCPFLFPFET 2213
Fly 2214 RQLYFNCTSFGASRSIVCLQSQRDVTVERQRIPIMSPRRDDHEFRIGRLKHERVKVPRNEDLLMW 2278
Fly 2279 AMQVMKTHCN---RKSVLEVEFLDEEGTGL-GPTLEFYALVAAEIQRSDLCMWLCDDDLGEDTEN 2339
Fly 2340 STQSAEGNSKPV-----GYYVNRREHGIFPAPLPQNSEICENVLKYFWFFGVFVAKVLQDMRLVD 2399
Fly 2400 IPLSTSFLQLLCHNKVLSRNLQKVISDRRNGDLSVVSEDSDIVETCTKLLRTDSNKSNAFGGILS 2464
Fly 2465 LENLKEIDPTRYQFL-----QEMQNLLLRKQSIEFDDTISAEKKHELINELKLQTQNGLEVSLED 2524
Fly 2525 LALTFTYLPSSSIYGYTQAELLPNGSSVNVTIDNLEAYCELLMNFILQDGIAQQMKAFSDGFNEV 2589
Fly 2590 FPLKKLAAFTPSEARMMICGEQFPHWSRED------IISYTE--PKLGYNKDSPGFQRFVNVLLS 2646
Fly 2647 MSGDERKAFLQFTTGCSSLPPGGLANLHPRLTVVR-KVDAGVGS---YPSVNTCVHYLKLPDYPT 2707
Fly 2708 EEIMKERLLTATKE--KGFHL 2726 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Ufd4 | NP_609369.1 | ANK repeat | 393..420 | CDD:293786 | |
ANK | 396..509 | CDD:238125 | 15/54 (28%) | ||
ANK repeat | 422..453 | CDD:293786 | |||
ANK repeat | 455..484 | CDD:293786 | 8/25 (32%) | ||
F5_F8_type_C | 1173..1298 | CDD:329041 | 19/124 (15%) | ||
MIB_HERC2 | 1333..1389 | CDD:310955 | 13/74 (18%) | ||
DamX | 1576..>1725 | CDD:330571 | 33/192 (17%) | ||
HECTc | 2265..2725 | CDD:238033 | 101/487 (21%) | ||
TOM1 | NP_010745.3 | DUF908 | 92..387 | CDD:399185 | |
DUF913 | 448..>683 | CDD:399192 | |||
MSCRAMM_ClfB | <1879..2061 | CDD:411414 | 41/251 (16%) | ||
DUF4414 | 2328..2357 | CDD:405126 | 6/35 (17%) | ||
HUL4 | 2385..3268 | CDD:227354 | 212/1107 (19%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG5021 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.900 |