Sequence 1: | NP_609369.1 | Gene: | Ufd4 / 34378 | FlyBaseID: | FBgn0032208 | Length: | 2727 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_195908.1 | Gene: | UPL4 / 831758 | AraportID: | AT5G02880 | Length: | 1502 | Species: | Arabidopsis thaliana |
Alignment Length: | 1377 | Identity: | 331/1377 - (24%) |
---|---|---|---|
Similarity: | 545/1377 - (39%) | Gaps: | 359/1377 - (26%) |
- Green bases have known domain annotations that are detailed below.
Fly 1513 LSRELEHISDLSAINNSMPAINSSNVSDLATISENLSLT-----ELSKENICRVLTPSYKPAESV 1572
Fly 1573 TASQSSSHP----------------DVQSSSPRENDIKNISNIEENNKMNANNSVNKISKDLL-- 1619
Fly 1620 --------ANLRTSNIAGCPPVTQLST-EALEMIDKMRDGVDMIRNMSNS-----ILSTDTFPVP 1670
Fly 1671 CTNVPVGGKKTPK-----------------AQALINPDNANQKQIIVTSEEFPT----------- 1707
Fly 1708 --KSSKKPSVTLKPAQQPNAVLSIVDIKE------------------QPISNENVSVPSQMSI-- 1750
Fly 1751 -----------SVPN--LTTTSASEVPSTSEVATHTGLLETFAA-----IARRRTSQGTNIQDNQ 1797
Fly 1798 IMNAEANVNEHGDQNASGSFLGHSVTSLVKLALSSNFHSGLLSTAQSYPSLSSNNSENIAPS--- 1859
Fly 1860 NPSNTSAGQQSASTINHTLTMSLTSTSSDSEQVSLEDFLESCRAPALLGDLDDEDDM------DE 1918
Fly 1919 DNDEEENEDEYEEVGNTLLQVMVSRNLLTFMDDEAMENRLVGVTKRKSWDDEFVLKRQFSALIPA 1983
Fly 1984 FDPRPGRTNVNQTSDLEISPL--GAELPKPQQSGGPETIEQ-----PLLGLKLRGPGIGGIPEVE 2041
Fly 2042 IDLSNTDWTIFRAVQELLQCSQLNKLDKFRKIWEPT--------YTIVYREVSPEAQEST----- 2093
Fly 2094 --CLESEEF-PQTPDVSSKSGASTLSPNSPMHIGFNVADNNLCSVDDVLELLTQINGLNQ----- 2150
Fly 2151 --------------SEIDSDVKEHGVSVLSEDLFISKKITNKLQQQIQDPLVLASNALPNWCENL 2201
Fly 2202 NQSCPFLFPFETRQLYFNCTSFGASRSIVCLQSQRDVTVERQRIPIMSPRRDDHEFRIGRLKHER 2266
Fly 2267 VKVPRNEDLLMWAMQVMKTHCNRKSVLEVEFLDEEGTGLGPTLEFYALVAAEIQRSDLCMWL--C 2329
Fly 2330 DDDLGEDTENSTQSAEGNSKPVGYYVNRREHGIFPAPLPQNSEICENVLKYFWFFGVFVAKVLQD 2394
Fly 2395 MRLVDIPLSTSFLQLLCHNKVLSRNLQKVISDRRNGDLSVVSEDSDIVETCTKLLRTDSNKSNAF 2459
Fly 2460 GGILSLENLKEIDPTRYQFLQEMQNLLLRKQSIEFDDTISAEKKHELINELKLQTQNGLEVSLED 2524
Fly 2525 LALTFTYLPSSSIYGYTQAELLPNGSSVNVTIDNLEAYCELLMNFILQDGIAQQMKAFSDGFNEV 2589
Fly 2590 FPLKKLAAFTPSEARMMICGEQFPHWSREDIISYTEPKLGYNKDSPGFQRFVNVLLSMSGDERKA 2654
Fly 2655 FLQFTTGCSSLPPGGLANLHPRLTVVRK--VDAGVGSYPSVNTCVHYLKLPDYPTEEIMKERLLT 2717
Fly 2718 A-TKEKG-FHLN 2727 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Ufd4 | NP_609369.1 | ANK repeat | 393..420 | CDD:293786 | |
ANK | 396..509 | CDD:238125 | |||
ANK repeat | 422..453 | CDD:293786 | |||
ANK repeat | 455..484 | CDD:293786 | |||
F5_F8_type_C | 1173..1298 | CDD:329041 | |||
MIB_HERC2 | 1333..1389 | CDD:310955 | |||
DamX | 1576..>1725 | CDD:330571 | 40/210 (19%) | ||
HECTc | 2265..2725 | CDD:238033 | 153/465 (33%) | ||
UPL4 | NP_195908.1 | ARM | 156..264 | CDD:237987 | |
armadillo repeat | 156..181 | CDD:293788 | |||
armadillo repeat | 189..226 | CDD:293788 | |||
armadillo repeat | 230..263 | CDD:293788 | |||
HEAT repeat | 277..303 | CDD:293787 | |||
HECTc | 1114..1500 | CDD:238033 | 153/464 (33%) | ||
HECTc | 1136..1497 | CDD:214523 | 146/438 (33%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG5021 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D34110at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 1 | 1.000 | - | - | otm2761 | |
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR45670 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 1 | 0.960 | - | - | ||
6 | 5.880 |