DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ufd4 and HECTD3

DIOPT Version :9

Sequence 1:NP_609369.1 Gene:Ufd4 / 34378 FlyBaseID:FBgn0032208 Length:2727 Species:Drosophila melanogaster
Sequence 2:NP_078878.3 Gene:HECTD3 / 79654 HGNCID:26117 Length:861 Species:Homo sapiens


Alignment Length:805 Identity:166/805 - (20%)
Similarity:275/805 - (34%) Gaps:228/805 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly  2032 PGIGGIPEVEIDLSNTDWTIFRAVQELLQCSQLNKLDKFRKI--WEPTYTIVYRE---VSPEAQE 2091
            |..||...|.||..|          .|.:..||..:| :|.:  ||....:.|..   ..|:..|
Human   145 PAEGGARLVPIDTPN----------HLQRQQQLFGVD-YRPVLRWEQVVDLTYSHRLGSRPQPAE 198

  Fly  2092 STCLESEEFPQTPDVSSKSGASTLSPNSPMHIGFNVADNNLCSVDDVLELLTQINGLNQSEIDSD 2156
            :.....:.....|...:......|......|:|  ..|.||.||...:|.:         ::.|.
Human   199 AYAEAVQRLLYVPPTWTYECDEDLIHFLYDHLG--KEDENLGSVKQYVESI---------DVSSY 252

  Fly  2157 VKEHGVSVLSEDLFISKKITNKLQQQIQDPLVLASNALPNWCENLNQSC---------------P 2206
            .:|..||.|::                       |||...| |:....|               .
Human   253 TEEFNVSCLTD-----------------------SNADTYW-ESDGSQCQHWVRLTMKKGTIVKK 293

  Fly  2207 FLFPFETRQLYFNCTSFGASRSIVC------LQSQRDVTVERQ-------------RIPIMSPR- 2251
            .|...:|..     .:|...|.:|.      |:...||:::..             .:||:..| 
Human   294 LLLTVDTTD-----DNFMPKRVVVYGGEGDNLKKLSDVSIDETLIGDVCVLEDMTVHLPIIEIRI 353

  Fly  2252 ---RDDHEFRIG---RLKHERVKVPRNEDLLMWAMQVMKTHCNRKSVLE---------------- 2294
               |||     |   ||:..::|..|..:|.:.|.....|...|...||                
Human   354 VECRDD-----GIDVRLRGVKIKSSRQRELGLNADLFQPTSLVRYPRLEGTDPEVLYRRAVLLQR 413

  Fly  2295 -VEFLDEEGTGLGPTLEFYALVAAEIQRSDLCMWLCDDDLG------EDTENSTQSAEGNSKPVG 2352
             ::.||.....|.|..:......:||::....:.|.....|      .|:|:|..|....     
Human   414 FIKILDSVLHHLVPAWDHTLGTFSEIKQVKQFLLLSRQRPGLVAQCLRDSESSKPSFMPR----- 473

  Fly  2353 YYVNRR---EHGIFPAPLPQNSEICENVLKYFWFFGVFVAKVLQDMRLVDIPLSTSFLQLLCHNK 2414
            .|:|||   ||...|:..|    .|:|        .|| .:|.:.::..|           .:.|
Human   474 LYINRRLAMEHRACPSRDP----ACKN--------AVF-TQVYEGLKPSD-----------KYEK 514

  Fly  2415 VLS-------------RNLQKVISDRRNG---DLSVVSED-----SDIVETCTKLLRTDSNKSNA 2458
            .|.             :.:.:.|.|:..|   .|:.:||:     :|........:|| :|:.|.
Human   515 PLDYRWPMRYDQWWECKFIAEGIIDQGGGFRDSLADMSEELCPSSADTPVPLPFFVRT-ANQGNG 578

  Fly  2459 FGGI--LSLENLKEIDPTRYQFLQEMQNLLLRKQSIEF--------------DDTISAEKKHELI 2507
            .|..  :.:.|....|..:|:::.::....||.:  ||              .:.:|..|....:
Human   579 TGEARDMYVPNPSCRDFAKYEWIGQLMGAALRGK--EFLVLALPGFVWKQLSGEEVSWSKDFPAV 641

  Fly  2508 NEL---KLQTQNGLEVSLEDL----ALTFTYLPSSSIYGYTQAELLPNGSSVNVTIDNLEAYCEL 2565
            :.:   .|:...|::....:.    .||||.:.|..    ...||:|.|:.:.|...:...:.:|
Human   642 DSVLVKLLEVMEGMDKETFEFKFGKELTFTTVLSDQ----QVVELIPGGAGIVVGYGDRSRFIQL 702

  Fly  2566 LMNFILQDGIAQQMKAFSDGFNEVFPLKKLAAFTPSEARMMICGEQFPHWSREDIISYT-----E 2625
            :....|::. .:|:.|...|..:|.|...|...|..|....:||:  |..:.:.:...|     |
Human   703 VQKARLEES-KEQVAAMQAGLLKVVPQAVLDLLTWQELEKKVCGD--PEVTVDALRKLTRFEDFE 764

  Fly  2626 PKLGYNKDSPGFQRFVNVLLSMSGDERKAFLQFTTGCSSLPPGGLANLHPRLTVVRKVDAGVGSY 2690
            |     .|| ..|.|...|.:.:.::|..||:|.||.|.||  ....::|........||    .
Human   765 P-----SDS-RVQYFWEALNNFTNEDRSRFLRFVTGRSRLP--ARIYIYPDKLGYETTDA----L 817

  Fly  2691 PSVNTCVHYLKLPDYPTEEIMKERL 2715
            |..:||...|.||.|.:.::.:|:|
Human   818 PESSTCSSTLFLPHYASAKVCEEKL 842

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ufd4NP_609369.1 ANK repeat 393..420 CDD:293786
ANK 396..509 CDD:238125
ANK repeat 422..453 CDD:293786
ANK repeat 455..484 CDD:293786
F5_F8_type_C 1173..1298 CDD:329041
MIB_HERC2 1333..1389 CDD:310955
DamX 1576..>1725 CDD:330571
HECTc 2265..2725 CDD:238033 111/526 (21%)
HECTD3NP_078878.3 APC10-HECTD3 238..371 CDD:176487 31/175 (18%)
HECT 579..845 CDD:366212 64/285 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5021
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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