DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ufd4 and Hectd3

DIOPT Version :9

Sequence 1:NP_609369.1 Gene:Ufd4 / 34378 FlyBaseID:FBgn0032208 Length:2727 Species:Drosophila melanogaster
Sequence 2:NP_780453.1 Gene:Hectd3 / 76608 MGIID:1923858 Length:861 Species:Mus musculus


Alignment Length:808 Identity:165/808 - (20%)
Similarity:275/808 - (34%) Gaps:234/808 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly  2032 PGIGGIPEVEIDLSNTDWTIFRAVQELLQCSQLNKLDKFRKI--WEPTYTIVYRE---VSPEAQE 2091
            |..||...|.||..:          .|.:..||..:| :|.:  ||....:.|..   ..|:..|
Mouse   145 PAEGGARLVPIDTPD----------HLQRQQQLFGVD-YRPVLRWEQVVDLTYSHRLGSRPQPAE 198

  Fly  2092 STCLESEEFPQTPDVSSKSGASTLSPNSPMHIGFNVADNNLCSVDDVLELLTQINGLNQSEIDSD 2156
            :.....:.....|...:......|......|:|  ..|.||.||...:|.:         ::.|.
Mouse   199 AYTEAIQRLLYVPPTWTYECDEDLIHFLYDHLG--KEDENLGSVKQYVESI---------DVSSY 252

  Fly  2157 VKEHGVSVLSEDLFISKKITNKLQQQIQDPLVLASNALPNWCENLNQSC---------------P 2206
            .:|..||.|::                       |||...| |:....|               .
Mouse   253 TEEFNVSCLTD-----------------------SNADTYW-ESDGSQCQHWVRLTMKKGTIVKK 293

  Fly  2207 FLFPFETRQLYFNCTSFGASRSIVC------LQSQRDVTVERQ-------------RIPIMSPR- 2251
            .|...:|..     .:|...|.:|.      |:...||.::..             .:||:..| 
Mouse   294 LLLTVDTTD-----DNFMPKRVVVYGGEGDNLKKLSDVNIDETLIGDVCVLEDMTVHLPIIEIRI 353

  Fly  2252 ---RDDHEFRIG---RLKHERVKVPR------NEDLLMWAMQVMKTHCN--------RKSVL--- 2293
               |||     |   ||:..::|..|      |.||...|..|......        |::||   
Mouse   354 VECRDD-----GIDVRLRGVKIKSSRQRELGLNADLFQPASLVRYPRLEGTDPEVLYRRAVLLQR 413

  Fly  2294 EVEFLDEEGTGLGPTLEFYALVAAEI-----------QRSDL---CMWLCDDDLGEDTENSTQSA 2344
            .::.||.....|.|..:......:||           ||..|   |:        .|:|:|..|.
Mouse   414 FIKILDSVLHHLVPAWDHTLGTFSEIKQVKQFLLLSRQRPSLVAQCL--------RDSESSKPSF 470

  Fly  2345 EGNSKPVGYYVNRR---EHGIFPAPLPQNSEICENVLKYFWFFGVFVAKVLQDMRLVDIPLSTSF 2406
            ...     .|:|||   ||...|:..|    .|:|        .|| .:|.:.::..|       
Mouse   471 MPR-----LYINRRLAMEHRACPSRDP----ACKN--------AVF-TQVYEGLKPSD------- 510

  Fly  2407 LQLLCHNKVLS-------------RNLQKVISDRRNG---DLSVVSED-----SDIVETCTKLLR 2450
                .:.|.|.             :.:.:.|.|:..|   .|:.:||:     :|........:|
Mouse   511 ----KYEKPLDYRWPMRYDQWWECKFIAEGIIDQGGGFRDSLADMSEELCPSSADTPVPLPFFVR 571

  Fly  2451 TDSNKSNAFGGI--LSLENLKEIDPTRYQFLQEMQNLLLRKQSIEF--------------DDTIS 2499
            | :|:.|..|..  :.:.|....|..:|:::.::....||.:  ||              .:.:|
Mouse   572 T-ANQGNGTGEARDMYVPNPSCRDFAKYEWIGQLMGAALRGK--EFLVLALPGFVWKQLSGEEVS 633

  Fly  2500 AEKKHELINEL---KLQTQNGLEVSLEDL----ALTFTYLPSSSIYGYTQAELLPNGSSVNVTID 2557
            ..|....::.:   .|:...|::....:.    .||||.:.|..    ...||:|.|:.:.|..:
Mouse   634 WSKDFPAVDSVLVKLLEVMEGVDKETFEFKFGKELTFTTVLSDQ----QVVELIPGGTGIVVEYE 694

  Fly  2558 NLEAYCELLMNFILQDGIAQQMKAFSDGFNEVFPLKKLAAFTPSEARMMICGEQFPHWSREDIIS 2622
            :...:.:|:....|::. .:|:.|...|..:|.|...|...|..|....:||:  |..:.:.:..
Mouse   695 DRSRFIQLVRKARLEES-KEQVAAMQAGLLKVVPQAVLDLLTWQELEKKVCGD--PEVTVDALRK 756

  Fly  2623 YTEPKLGYNKDSPGFQRFVNVLLSMSGDERKAFLQFTTGCSSLPPGGLANLHPRLTVVRKVDAGV 2687
            .|..: .:.......|.|...|.:.:.::|..||:|.||.|.||  ....::|........||  
Mouse   757 LTRFE-DFEPSDTRVQYFWEALNNFTNEDRSRFLRFVTGRSRLP--ARIYIYPDKLGYETTDA-- 816

  Fly  2688 GSYPSVNTCVHYLKLPDYPTEEIMKERL 2715
              .|..:||...|.||.|.:.::.:|:|
Mouse   817 --LPESSTCSSTLFLPHYASAKVCEEKL 842

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ufd4NP_609369.1 ANK repeat 393..420 CDD:293786
ANK 396..509 CDD:238125
ANK repeat 422..453 CDD:293786
ANK repeat 455..484 CDD:293786
F5_F8_type_C 1173..1298 CDD:329041
MIB_HERC2 1333..1389 CDD:310955
DamX 1576..>1725 CDD:330571
HECTc 2265..2725 CDD:238033 111/529 (21%)
Hectd3NP_780453.1 APC10-HECTD3 238..371 CDD:176487 31/175 (18%)
HECTc 528..849 CDD:214523 71/332 (21%)
HECT 586..845 CDD:279026 59/273 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5021
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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