Sequence 1: | NP_609369.1 | Gene: | Ufd4 / 34378 | FlyBaseID: | FBgn0032208 | Length: | 2727 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_080268.1 | Gene: | Herc6 / 67138 | MGIID: | 1914388 | Length: | 1003 | Species: | Mus musculus |
Alignment Length: | 891 | Identity: | 191/891 - (21%) |
---|---|---|---|
Similarity: | 298/891 - (33%) | Gaps: | 313/891 - (35%) |
- Green bases have known domain annotations that are detailed below.
Fly 1994 NQTSDLEISPLGAELPKPQQSG--GPETIEQPLLGLKLRGPGIGGIPEVEIDLSNTDWTIFRAVQ 2056
Fly 2057 ELLQCSQLNKLDKFRKIWEPTYTI--VYREVSPEAQESTCLESEEFPQTPDVSSK---SGASTLS 2116
Fly 2117 PNSPMHIGF----NVADNNLCSVDDVLELLTQINGLNQS-------------------------- 2151
Fly 2152 -------------------EIDSDVKEHGVSVLSEDLFISKKITNKLQQQIQDPLVLASNALPNW 2197
Fly 2198 CENLNQSC---------PFLFPFETRQLYF----NCT-----------SFGASRSI--------- 2229
Fly 2230 ---VCLQ----SQRDVTVERQRIPIMSPRRDDHEFRIGRLKHE---RVKVPRNEDLLMWAMQVMK 2284
Fly 2285 THCNRKSVLEVEFLDEEGTGLGPTLEFYALVAAEIQRSDLCMWLCDDDLGEDTENSTQSAEGNSK 2349
Fly 2350 PVGYYVNRREHGIFPAPLPQNSEI--CENVLKYFWFFGVFVAKVLQDMRLVDIPLSTSFL----- 2407
Fly 2408 -QLLCHNKVLSRNLQKVISDRRNGDLSVVSEDSDIVET----CTKLLRTDS-------------- 2453
Fly 2454 --------NKSNAF-GGI---LSLENLKEID---PTRYQFLQEMQNLLLRKQSIEFDDTISAEKK 2503
Fly 2504 HELINELKLQTQNGLEV-------SLEDLALTFTYLPSSSIY-GYTQAELLPNGSSVNVTIDNLE 2560
Fly 2561 AYCELLMNFILQDGIAQQMKAFSDGFNEVFPLKKLAAFTPSEARMMICGEQFPHWSR-EDIISYT 2624
Fly 2625 EPKLGYNKDSPGFQRFVNVLLSMSGDERKAFLQFTTGCSSLPPGGLANLHPRLTVVRKVDAGV-- 2687
Fly 2688 --------GSYPSVNTCVHYLKLPDYPTEEIMKERLLTA-TKEKGF 2724 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Ufd4 | NP_609369.1 | ANK repeat | 393..420 | CDD:293786 | |
ANK | 396..509 | CDD:238125 | |||
ANK repeat | 422..453 | CDD:293786 | |||
ANK repeat | 455..484 | CDD:293786 | |||
F5_F8_type_C | 1173..1298 | CDD:329041 | |||
MIB_HERC2 | 1333..1389 | CDD:310955 | |||
DamX | 1576..>1725 | CDD:330571 | |||
HECTc | 2265..2725 | CDD:238033 | 127/524 (24%) | ||
Herc6 | NP_080268.1 | RCC1 1 | 40..91 | ||
RCC1 | 40..89 | CDD:278826 | |||
RCC1 2 | 92..144 | ||||
RCC1 | 92..142 | CDD:278826 | |||
RCC1 | 145..195 | CDD:278826 | |||
RCC1 3 | 146..197 | ||||
RCC1_2 | 183..211 | CDD:290274 | |||
RCC1 4 | 199..252 | ||||
RCC1_2 | 237..266 | CDD:290274 | 1/3 (33%) | ||
RCC1 5 | 253..303 | 15/66 (23%) | |||
RCC1 | 253..300 | CDD:278826 | 15/63 (24%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 261..281 | 8/27 (30%) | |||
chaperonin_like | <570..>652 | CDD:295468 | 22/109 (20%) | ||
HECTc | 658..999 | CDD:238033 | 97/385 (25%) | ||
HECTc | 682..999 | CDD:214523 | 91/357 (25%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG5021 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.900 |