DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ufd4 and plekha7a

DIOPT Version :9

Sequence 1:NP_609369.1 Gene:Ufd4 / 34378 FlyBaseID:FBgn0032208 Length:2727 Species:Drosophila melanogaster
Sequence 2:NP_001129715.1 Gene:plekha7a / 571486 ZFINID:ZDB-GENE-050419-75 Length:1197 Species:Danio rerio


Alignment Length:982 Identity:187/982 - (19%)
Similarity:310/982 - (31%) Gaps:341/982 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly  1681 TPKAQALINPDNAN-----QKQIIVTSEEFPTKSSKKPSVTLK---PAQQPNAVLSIVDIKEQPI 1737
            |.|.....:||:.|     :||.:..:....:....||.|...   |..:....:..|:|:..|.
Zfish   262 TVKRDECGHPDHVNVSEKLKKQAVPQTNHINSYVIPKPEVIQSDGLPEDKREGFVGEVEIQVTPR 326

  Fly  1738 SNENVSVPS------QMSISVPNLTTTS--ASEVPSTSEVATHTGLLETFAAIARRRTSQGTNIQ 1794
            ..|.....|      ::.:..|..|..|  ||..||.:        :.|...:.|    .||.|:
Zfish   327 EMEQARGKSPASRVVEVEVLAPGSTPPSRVASRAPSRA--------VSTPPVVQR----NGTPIE 379

  Fly  1795 DNQIMNAEANVNEHGD---QNASGSFLGHSVTSLVKLALSSNFHSGLLSTAQSYPSLSSNNSENI 1856
            .|.:...:........   |....|.| ..|.:.||  :......||:||..:.|       ...
Zfish   380 QNGMPGCQRGATPSAQTPVQVQRRSTL-EQVENWVK--VQKEERHGLVSTESTVP-------RRT 434

  Fly  1857 APSNPSNTSAGQQSASTINHTLTMSLTSTSSDSEQVSLEDFLESCRAPALLGDLDDEDDMDEDND 1921
            .|.:|...:..:.          .||..||..|             .||....|..|.....|  
Zfish   435 PPIHPKYGTMDKY----------QSLPKTSRQS-------------PPAPHHQLPSEYKYSHD-- 474

  Fly  1922 EEENEDEYEEVGNTLLQVMVSRNLLTFMDDEAMENRLVGVTKRKSWDD-------EFVLKRQF-- 1977
                                  .|..|       .::.|.|||.:..|       |:..::||  
Zfish   475 ----------------------RLNHF-------QKIHGHTKRPTTHDNTVWQLFEWQQRQQFRH 510

  Fly  1978 -SALIPAFDPRPG--------RTNVNQTSDLEISPLGAELPKPQQSGGPETIEQPLLGLKLRGPG 2033
             |...|.:.|.|.        |.|.:.:..:.:.|..|::|.|    ||.       |.:|..|.
Zfish   511 GSPFAPVYTPAPDYSTAVSSTRNNPDVSRSVSVPPTLADIPPP----GPP-------GARLMSPR 564

  Fly  2034 IGGIPEVEIDLSNTDWTIFRAVQELLQCSQLNKLDKF------RKIWEP----TYTIVYREVSPE 2088
            ....|...:.:...:   .|.:.|:...:..::|..:      |:...|    |:|:....:..:
Zfish   565 RPHTPAERVTVRPLE---DRPIVEVPPSNSPHRLRSYKSATIERRSMPPSAYITHTVSAPSLRGK 626

  Fly  2089 AQESTCLESEEFPQTPDVSSKSGASTLS--PNSPMHIGFNVAD---NNLCSVDDVL-ELLTQING 2147
            ..:.|.:..::..:..|: ..||...|.  |..|:.:..:..|   :.||..|.:| ||..:::|
Zfish   627 TADDTYMHLKKGLEYLDL-KVSGTEALKGRPAKPVKVAESDVDVTLSRLCEQDKILQELEFRLSG 690

  Fly  2148 LNQSEIDSDVKEHGVSVLSEDLFISKKITNKLQQQIQDPLVLASNALPNWCENLNQSCPFLFPFE 2212
            |..   |.|..|   |||.        ::::..:|.:|.        |:..:.:        .::
Zfish   691 LKD---DKDKLE---SVLD--------VSHQQMEQYKDQ--------PSHTDKI--------AYQ 725

  Fly  2213 TRQLYFNCTSFGASRSIVCLQSQRDVTVERQRIPIMSPRRDDHEFRIGRLKHERVKVPRNEDLLM 2277
            .|.|..:.....|..|.|..:.:|              ..||:.           .:.::.:.|.
Zfish   726 QRLLQEDLVHIRADISRVSTEMER--------------AWDDYS-----------GMEQSVEQLR 765

  Fly  2278 WAMQVMKTHC---NRKSVLEVEF--LDEEGTGLGPTLEFYALV---------------------- 2315
            ..:|...|.|   ..|:.|:.|.  :::..|||..|.|.:.:.                      
Zfish   766 DVLQTQMTLCTSPQEKNQLKRELWRMEDVMTGLSSTKETFKITVDSVKNPERKLVPSVIESTVPS 830

  Fly  2316 ------AAEI---QR----SDLCMWLCDDDLGEDTENSTQSAEGNSKPVGYYVNRREHGIFP-AP 2366
                  |||:   ||    |.|.:.|.::||            .|..||   .|..|....| .|
Zfish   831 RCMTPSAAEVRSPQRSLTSSPLSLPLDNEDL------------RNRHPV---PNWEEDDAPPRPP 880

  Fly  2367 LPQNSEICENVLKYFWFFGVFVAKVLQDMR----LVDIPLSTSFLQLLCHNKVLSRNLQKVISDR 2427
            ||                      :|.|..    :..:|..||.::   |..|  |.|::...:|
Zfish   881 LP----------------------LLYDEDTPPVVPPLPKETSVIR---HTSV--RGLKRQSDER 918

  Fly  2428 R--------NGD-------------LSVVSEDSDIVE------------------------TCTK 2447
            :        |||             |.|.:..:|.|:                        :|: 
Zfish   919 KRDRESSYSNGDYRLELRSYLSEPELPVSAHGADHVDPGYLTLQRRGLSGSSSRINQYGVASCS- 982

  Fly  2448 LLRTDSNKSNAFGGILSLENLKEIDPTRYQFLQEMQNLLLRKQSIEFDDTISAEKKHE--LINEL 2510
             ||.|...|.......:||.|...:|   |..|:.|...:| .|:|  :.:...|:|:  |:.|.
Zfish   983 -LRRDLELSTMERPKSALERLCSGEP---QLEQQSQPQRVR-MSVE--EQLERMKRHQRALVRER 1040

  Fly  2511 KLQTQNG 2517
            |.....|
Zfish  1041 KRNLSQG 1047

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ufd4NP_609369.1 ANK repeat 393..420 CDD:293786
ANK 396..509 CDD:238125
ANK repeat 422..453 CDD:293786
ANK repeat 455..484 CDD:293786
F5_F8_type_C 1173..1298 CDD:329041
MIB_HERC2 1333..1389 CDD:310955
DamX 1576..>1725 CDD:330571 11/51 (22%)
HECTc 2265..2725 CDD:238033 69/345 (20%)
plekha7aNP_001129715.1 WW 55..84 CDD:278809
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 98..148
PH_PEPP1_2_3 153..256 CDD:270068
PH 159..255 CDD:278594
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 348..384 13/47 (28%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 423..467 14/73 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 508..577 17/79 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 830..928 29/139 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1032..1064 5/16 (31%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5021
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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