DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ufd4 and magi2a

DIOPT Version :9

Sequence 1:NP_609369.1 Gene:Ufd4 / 34378 FlyBaseID:FBgn0032208 Length:2727 Species:Drosophila melanogaster
Sequence 2:NP_001314782.1 Gene:magi2a / 564112 ZFINID:ZDB-GENE-050810-4 Length:1503 Species:Danio rerio


Alignment Length:1180 Identity:228/1180 - (19%)
Similarity:382/1180 - (32%) Gaps:365/1180 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly  1130 FDEEGLLFYIGSNAKTCDWVNP--AQYGLVQVTSSEGKTLPYG--KLEDILSR----DSISLNCH 1186
            :.|:|.:::|..|.||..|::|  |:.........|.: ||||  |::|.:..    |.|     
Zfish   314 YTEKGEVYFIDHNTKTTSWLDPRLAKKAKPPEECKENE-LPYGWEKIDDPIYGTYYVDHI----- 372

  Fly  1187 TKDNKKAWFAIDL----------------GVYIIPTAYTLRHARGYGRSALR---NWL---LQGS 1229
               |::..|...:                |:..:|.....|....:.|...:   ::|   ||.|
Zfish   373 ---NRRTQFENPVLEAKRRLQHQQQMQSQGLSSLPLPAVYREKPLFTRDPTQLKGSFLSTPLQKS 434

  Fly  1230 KDGSTWTTLSTHVDDKSL----VEPGSTATWPINCATDDSVWYRHIRIQQNGRNASGQTHYLSLS 1290
            ..|..:|.:.....|:.|    |.|...|......||.|.:.|      .|.....|.||...:.
Zfish   435 NMGFGFTIIGGDEPDEFLQVKSVIPDGPAAQDGKMATGDVIVY------INDVCVLGTTHADVVK 493

  Fly  1291 GFEIYGRVVGVADDIGKSV-------------KEAEAKTR-------------RERRQIRAQLKH 1329
            .|:        :..||:||             .|..|.|.             ..|....:.:::
Zfish   494 LFQ--------SVPIGQSVTLVLCRGYPLPYDPEDAANTLLSPLGLIDRPLLVNGRNSYDSYMEY 550

  Fly  1330 MTTGARVIRGVDWRWEEQDGCAEGTITGEIHNGWIDVKWDHG-VRNSYRMGAEGKYDLKLADCEY 1393
            ::..||.:..:.            |...:.|.|  |...|.| :.:|..|.:.|....:|.....
Zfish   551 ISRTARFVDPLQ------------TTMVQPHPG--DTHLDAGPLEDSVSMASSGAAGGELLTINM 601

  Fly  1394 LSAFDGNQSMGSASTAAKPSEKGGNTLTS-RKSSSTPSLPEA---TEKNQNPEGASNQTVSADNL 1454
            :...|     |...|.|  ...||..:.. .::...|.|.|.   .|.||.|         |..|
Zfish   602 VKGAD-----GFGFTIA--DSNGGQRVKQILEAQGCPGLCEGDLIVEINQQP---------ALTL 650

  Fly  1455 AWKQTVETIAENVFASAKTQIISNQLAMNTSSSREARAKHKESGTNQM-----------HKDNIS 1508
            :..|.||.:.|....:..|.:|                  :..||...           |.|.:|
Zfish   651 SHTQVVELLKECPIGTEATLVI------------------QRGGTGHFSPWKTTKQVLEHWDPLS 697

  Fly  1509 GPSPLSRELEHISDLS--AINNSMPAIN--SSNVSDLATISENLSLTELSK---ENICRVLTPSY 1566
            .|:         :.||  |:.:|.|.::  |....|||. .:...|.|.|:   ||    ..|..
Zfish   698 SPT---------TSLSVHALPHSAPYLHWPSGPEFDLAK-PDPYDLYEKSRAIYEN----RQPGL 748

  Fly  1567 KPAESVTASQSSSHPDVQSSSPRENDIKNISNIEENNKMNANNSVNKISKDLLANLRTSNIAGCP 1631
             |..|:.|..|:...:|:....|:.                            :......:.|..
Zfish   749 -PRASLPADPSAEFQEVEVHLRRQK----------------------------SGFGFRILGGEE 784

  Fly  1632 PVTQLSTEALE------MIDKMRDGVDMIRNMSNSILSTDTFPVPCTNVPVGGK----------- 1679
            |...:|.:|.|      :|:|.....|......:.::|.|       .:.|.||           
Zfish   785 PGQPVSPKAQEKILIGAIIEKSPADKDGRLRPGDELISVD-------GIVVAGKPHRYVIDLMHG 842

  Fly  1680 --KTPKAQALINPDNANQKQIIVTSEEFPTKSSKKPSVTLKPAQQPNAVLSIVDIKEQPISNENV 1742
              :|.:.:..:      ::::..|.|.|| ::.:.|..|...:.:.       |...:...|.  
Zfish   843 AARTGQVKLTV------RRRVQPTGEPFP-ENGRSPGSTQHSSPRS-------DFNSRMFCNN-- 891

  Fly  1743 SVPSQMSISVPNLT-----TTSASEVPSTSEVATHTGLLETF-----AAIARRRTSQGTNIQDNQ 1797
            |.|||.  |.|:.|     .|:|::....::|:......|.|     :::.|..|:....:....
Zfish   892 SAPSQN--SAPSTTGSSPPDTAANQNAQPNDVSIQRKETEGFGFVIISSLNRPETAAAAAVPHKI 954

  Fly  1798 IMNAEANVNEH------GDQ-----NASGSFLGHS-VTSLVKLALSSNFHSGLLSTAQSYPSLSS 1850
            ....|.:..:|      ||:     |.|...:.|: :..|:|       .:||..|.:..|...:
Zfish   955 GRIIEGSPADHCGKLKVGDRILAVNNQSIVNMPHADIVKLIK-------DAGLSVTLRIIPQEET 1012

  Fly  1851 NNSENIAPSNPSNTSAGQQS----------ASTINHTLTMSLTSTSSDSEQV-----------SL 1894
            |       |.||..|:.:||          .:|:|.|....|.::::.....           ..
Zfish  1013 N-------STPSAGSSEKQSPMAQPSPVCQPNTVNQTGAAPLANSNAQQNSAPQPSPIKQPISEA 1070

  Fly  1895 EDFLESCRAPALLGDLDDEDDMDEDNDEEENEDEYEEVGNTLLQVMVSRNLLTFMDDEAMENRLV 1959
            :..|.:..:||     :....:.:.|.:.:....|....:...:|...:::...:.....:.|..
Zfish  1071 QPSLVTQNSPA-----NHPSSVTQQNPQTQPVQTYSHDSSYRSEVKARQDVKPDIRQPFTDYRQP 1130

  Fly  1960 GVTKRKSWDDEFVLKRQFSALIPAFDPR-PGRTNVNQTSDLEISPLGAE-----LP---KPQQ-- 2013
            .|..|..               |..|.| |...:......|:..||.|:     ||   .||.  
Zfish  1131 PVDYRHP---------------PVADYRQPPTLDYRHPPLLDYRPLPADPRTFPLPDYRMPQDFD 1180

  Fly  2014 -----------------SGGPETIEQPLLGLKLR--GPGIG------GIPEVEIDLSNT-DWTIF 2052
                             .||.| .:..|..|:|.  ||.|.      |...:||:..:| |.|..
Zfish  1181 FFTVELEKGMKGFGFSIRGGRE-YKMDLFVLRLAEDGPAIRNGRMRVGDQIIEINGESTRDMTHA 1244

  Fly  2053 RAVQELLQCS--QLNKLDKFRKIWEPTY--TIVYREVSPEAQESTCLESEEFPQTPDVSSKSGAS 2113
            ||: ||::..  ::..|.|......|.|  :....:..|.|..|.   ||..|....:|:.|.:|
Zfish  1245 RAI-ELIKSGGRRVRLLLKRGTGQVPEYADSPAPWDAHPTASPSL---SEVAPPLDSLSNPSASS 1305

  Fly  2114 TLS-PNSPMH 2122
            .:: |..|.|
Zfish  1306 HVNPPTDPPH 1315

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ufd4NP_609369.1 ANK repeat 393..420 CDD:293786
ANK 396..509 CDD:238125
ANK repeat 422..453 CDD:293786
ANK repeat 455..484 CDD:293786
F5_F8_type_C 1173..1298 CDD:329041 29/154 (19%)
MIB_HERC2 1333..1389 CDD:310955 11/56 (20%)
DamX 1576..>1725 CDD:330571 23/167 (14%)
HECTc 2265..2725 CDD:238033
magi2aNP_001314782.1 PDZ_signaling 25..100 CDD:238492
NK 122..286 CDD:302627
WW 307..337 CDD:238122 8/22 (36%)
WW 352..381 CDD:278809 10/36 (28%)
PDZ 431..511 CDD:214570 23/93 (25%)
PDZ 595..676 CDD:214570 22/114 (19%)
PDZ 762..856 CDD:214570 16/134 (12%)
PDZ_signaling 920..1007 CDD:238492 17/93 (18%)
PDZ_signaling 1182..1262 CDD:238492 20/81 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5021
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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