Sequence 1: | NP_609369.1 | Gene: | Ufd4 / 34378 | FlyBaseID: | FBgn0032208 | Length: | 2727 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_005263140.1 | Gene: | HERC6 / 55008 | HGNCID: | 26072 | Length: | 1034 | Species: | Homo sapiens |
Alignment Length: | 1184 | Identity: | 228/1184 - (19%) |
---|---|---|---|
Similarity: | 366/1184 - (30%) | Gaps: | 495/1184 - (41%) |
- Green bases have known domain annotations that are detailed below.
Fly 1703 EEFPTKSSKKPSVTLK--PAQQPNA------VLSIVDIK---------EQPISNENVSVPSQMSI 1750
Fly 1751 SV---PNLTTTSASEVPSTSEVATHTGLLETFAAIARRRTSQGTNIQDNQIMNAEANVNEHGDQN 1812
Fly 1813 ASGSFLGHSVT-------------SLVKLALSSNFHS-GLLSTAQSYPSLSSNNSENIAPSNPSN 1863
Fly 1864 TSAGQQSASTINHTLTMSLTSTSSDSEQVSLEDFLE----------------------SCRAPAL 1906
Fly 1907 LGDLDDEDDMDEDNDEEENEDEYEEVGNTLLQVMVSRNLLTFMDDEAMENRLVGVTKRKSWDDEF 1971
Fly 1972 V---LKRQFSA---LIPAFDPRPGRTNVNQTSDLEISPLGAELPKPQQSGGPETIEQPLLGLKLR 2030
Fly 2031 GPGIGGIPEVEIDLSNTDWTIFRAVQELLQCSQLNKLDKFRKIWEPTYTIVYREVSPEAQESTCL 2095
Fly 2096 ESEEFPQTPDVSSKSGAST---LSPNSP-MHIGFN-----------------------------V 2127
Fly 2128 ADNNLCSVDDVLE--LLTQINGLNQSEIDSD----------VKE-HGVSV----LSEDLFISKKI 2175
Fly 2176 TNKL-------QQQIQD-PLVLASNALPNWCENLNQSCPFLFPFETRQLYFNCTSFGASRSIVCL 2232
Fly 2233 QSQRDVTVERQRIPIMSPRRDDHEFRIGRLKHERVKVPRNE------------------DLLMWA 2279
Fly 2280 MQVMKT-HCNRKSVLEVEFLDE---EGTGLGPTLEFYALVAAEIQRSDL----------CMWLCD 2330
Fly 2331 DDLGEDTENSTQSAEGNSKPVGYYVNRREHGIFPA-PLPQNSEICENVLKYFWFFGVFVAKVLQD 2394
Fly 2395 MRLVDIPLSTSFLQLLCHNKVLSRNLQKVISDRRNGDLSVVSEDSDIVETCTKLLRTDSNKSNAF 2459
Fly 2460 GGILSLENLKEIDPTRYQFLQEMQNLLLRKQSIEFDDTISAEKKHELINELKLQTQNGLEVSLED 2524
Fly 2525 L--ALTFTYLPSSSIYGYTQAELLPNGSSVNVTIDNLEAYCELLMNFILQDGIAQQMKAFSDGFN 2587
Fly 2588 EVFPLKKLAAFTPSEARMMICGEQFPHWSR-EDIISYTEPKLGYNKDSPGFQRFVNVLLSMSGDE 2651
Fly 2652 RKAFLQFTTGCSSLPPGGLANLH-----PRLTVVRKVDAGVGSYPSVNTCVHYLKLPDYPTEEIM 2711
Fly 2712 KERLLTA-TKEKGF 2724 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Ufd4 | NP_609369.1 | ANK repeat | 393..420 | CDD:293786 | |
ANK | 396..509 | CDD:238125 | |||
ANK repeat | 422..453 | CDD:293786 | |||
ANK repeat | 455..484 | CDD:293786 | |||
F5_F8_type_C | 1173..1298 | CDD:329041 | |||
MIB_HERC2 | 1333..1389 | CDD:310955 | |||
DamX | 1576..>1725 | CDD:330571 | 7/23 (30%) | ||
HECTc | 2265..2725 | CDD:238033 | 104/502 (21%) | ||
HERC6 | XP_005263140.1 | RCC1_2 | 27..54 | CDD:290274 | |
RCC1_2 | 89..118 | CDD:290274 | |||
RCC1 | 105..155 | CDD:278826 | |||
RCC1 | 158..208 | CDD:278826 | 8/31 (26%) | ||
RCC1 | 215..263 | CDD:278826 | 10/47 (21%) | ||
RCC1_2 | 250..279 | CDD:290274 | 10/58 (17%) | ||
RCC1 | 266..313 | CDD:278826 | 15/77 (19%) | ||
HECTc | 684..1026 | CDD:238033 | 100/485 (21%) | ||
HECTc | 711..1026 | CDD:214523 | 95/455 (21%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG5021 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.900 |