DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ufd4 and Magix

DIOPT Version :9

Sequence 1:NP_609369.1 Gene:Ufd4 / 34378 FlyBaseID:FBgn0032208 Length:2727 Species:Drosophila melanogaster
Sequence 2:NP_061302.2 Gene:Magix / 54634 MGIID:1859644 Length:324 Species:Mus musculus


Alignment Length:357 Identity:71/357 - (19%)
Similarity:109/357 - (30%) Gaps:108/357 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   205 GALKCFASVADRFTRKWVDPAPLAEYG---LTTELLK-----RLQSVGGNTHSSLTAAGTQPTSS 261
            |.|:...|...|...:.:|..|||...   ||..:.|     ||:...|  .|.|.:|..:.|.|
Mouse    18 GGLQGSRSPRARQLLERLDARPLAARAAADLTALVRKAGATLRLRHTEG--VSGLDSADIEVTDS 80

  Fly   262 SQPAAT-----------------TNSDAINENVAGTA-TISNSTKVKSSDAAASPQSISTTISLL 308
            ..|.||                 |....:.:|.|..| .:..:|...|.:....|.....|:|..
Mouse    81 RLPHATLVKHRPQHQRSETLGTWTEPLPVTQNKASYALKVPQATGRFSVELTRGPAGFGLTLSGG 145

  Fly   309 STLCRGSPSITHDILRSQLADALERALQGDERCVLDCMRFADLLLLLLFEGRQALNRGSNNPNQG 373
            ..:...:|...|.:|:...|....|...||              |:|...|:.         .||
Mouse   146 RNVSGDAPLTVHGLLKDGPAQRCGRLQAGD--------------LVLYINGQS---------TQG 187

  Fly   374 QLAPRPRRNNTNTDRTHRQLIDCIRSKDSEALREAIESGGIDVNCMDDVGQTLLNWASAFGTLEM 438
                          .||.|:::.||:..............:|.:.:.:||          |..:.
Mouse   188 --------------LTHAQVVERIRTGGPHLCLVLQRPQDMDGSRIKEVG----------GHRKT 228

  Fly   439 VEYLCEKGADVNKGQRSSSLHYAACFGRPAIAKILLKFGAYPDLRDEDGKTPLDKARERLDDGH- 502
            ...|..:|:.|......|.:|:.                  |..|.....:|     |.:..|| 
Mouse   229 DRSLDPRGSRVESRSTISPVHHR------------------PKTRTSPRPSP-----EAVAIGHV 270

  Fly   503 -REVA--------AILQSPGEWMSPDHSLLNK 525
             |.|.        .|..:||.|:.|....|::
Mouse   271 VRAVEHPTEDLENRIPGTPGPWLVPSEDRLSR 302

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ufd4NP_609369.1 ANK repeat 393..420 CDD:293786 3/26 (12%)
ANK 396..509 CDD:238125 19/122 (16%)
ANK repeat 422..453 CDD:293786 6/30 (20%)
ANK repeat 455..484 CDD:293786 3/28 (11%)
F5_F8_type_C 1173..1298 CDD:329041
MIB_HERC2 1333..1389 CDD:310955
DamX 1576..>1725 CDD:330571
HECTc 2265..2725 CDD:238033
MagixNP_061302.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..26 2/7 (29%)
PDZ 126..211 CDD:214570 21/121 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 216..263 11/79 (14%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5021
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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