DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ufd4 and kibra

DIOPT Version :9

Sequence 1:NP_609369.1 Gene:Ufd4 / 34378 FlyBaseID:FBgn0032208 Length:2727 Species:Drosophila melanogaster
Sequence 2:NP_001034055.1 Gene:kibra / 41783 FlyBaseID:FBgn0262127 Length:1288 Species:Drosophila melanogaster


Alignment Length:1374 Identity:262/1374 - (19%)
Similarity:445/1374 - (32%) Gaps:389/1374 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly  1126 HSFDF----------DEEGLLFYIGSNAKTCDWVNPAQYGLVQVTSSE--GKTLPYGKLEDILSR 1178
            |..||          |.:|..:||....|...|::|........|..:  |..||.|..|   |.
  Fly    50 HHSDFPLPDGWDIAKDFDGKTYYIDHINKKTTWLDPRDCYTKPQTFEDCVGDELPMGWEE---SY 111

  Fly  1179 D---------SISLNCHTKDNKKAWFAID---LGVYIIPTAYTLRHARG----------YGRSAL 1221
            |         .::.:...:|.::.|..:.   |..|:......|.:.|.          :.:...
  Fly   112 DPNIGPYYINHLAQSTQLEDPRQEWKTVQEQMLSDYLSAAQDQLENKREMFDVKQQRLLWAQEEY 176

  Fly  1222 RNWLLQGSKDG--STWTTLSTH--------------------------VDDKSLVEPGSTATWPI 1258
            .:..|..|:..  |:.:::|.|                          .:|.|..|.|....:.:
  Fly   177 NHLKLAASRSSLCSSSSSMSRHDPELLRADLMLARERVHQLKQELTHITNDISYTERGMNTLYSV 241

  Fly  1259 NCATDDSVWYRHIRIQQNGRNASGQTHYLSLSGFEIYGRVVGVADDIGKSVKE------AEAKTR 1317
            .         ..|..::||.....:.|.:.....:::..:|.     |:.|:|      .:.|..
  Fly   242 G---------EKINARENGCYDIAEVHAIREEMLKVHKSLVS-----GEKVREELMRSLVQIKNE 292

  Fly  1318 RERRQIRAQLKHMTTG-ARVIRGVDWRWEEQDGCAEGTITGEIHNG-----------WIDVKWDH 1370
            ..|:||..:...:.:. .||...     .:.|.|..   :||..||           |...:|..
  Fly   293 LGRQQISEENSDLASPFDRVCVA-----SQTDLCGS---SGENLNGGARFAEMAKTKWQYAEWRK 349

  Fly  1371 GVRNSYRMGAEGKYDLKLADCEYLSAFDGNQ-------------------SMGSASTAAKPSEKG 1416
            .::         |...:|||  ::...:..|                   .:.|.|..:: ||:.
  Fly   350 HIK---------KLQQQLAD--HVERIEPGQLESDKDRILLIQEKEKLLNDLNSISLKSR-SEEE 402

  Fly  1417 GNTLTSRKSSSTPSLPEATEKNQNPEGASNQTVSADNLAWKQTVETIAENVFASAK-TQIISNQL 1480
            ...:...:......|.||.|        :|.|..|:.|.:.:..:.:.:.:..:.| |:::..:|
  Fly   403 KRVIHQTRHKLEEDLKEAYE--------ANNTCVANRLRFHEEKQLLLDKLQEALKSTKLLEERL 459

  Fly  1481 ------------------AMNTSSSREARAKHKESGTNQMHKDNISGPSPL--------SRELEH 1519
                              :::|:||:.|.:      ...::.|..:..||:        |:.|..
  Fly   460 KSFSSESTFSISSGSSLGSLSTASSKSALS------FTDIYIDPFAVDSPIDVVDLRRRSQRLFQ 518

  Fly  1520 ISDLSAINNSMPAINSSNVSDLATISENLSLT------ELSKENICRVLTPSYKPAESVTASQSS 1578
            ......::...|.:.....::: |:|...||:      ...|.|.....||.....|...|:...
  Fly   519 QHQQQRLHPVHPVLQQQQSAEV-TLSPRSSLSMETPPASPMKYNAGADQTPQALKEEPTYANALP 582

  Fly  1579 SHPDVQSSSP------------RENDIKNISNIEEN-NKMNANNSVNKISKDLLANLRTSNIAGC 1630
            :.|...:..|            .::.:.:...:|.. .|:|....:|      ||....|.|:..
  Fly   583 APPAYTAPPPVPISGVRARPYDLDSTVLDCMMLEAKLQKLNMGTPLN------LAVAPLSPISEK 641

  Fly  1631 PPVTQLSTEALEMIDKMRDGVDMIRNMSNSILSTDT--FPVPCTNVPVGGKKTPKAQALINPDNA 1693
            |.:..|..|.|.......:...:...:||..::.|:  |.....::|    :...||..|.....
  Fly   642 PSLLDLPQEMLSRSSSTSNTRSVSAAVSNESVAGDSGVFEASRAHLP----RKELAQVQIGLKYL 702

  Fly  1694 NQKQIIVTSEE-------FPTKSSKKPSVTLKPAQQPNAVLSI----VDIKEQPISNENVSVPSQ 1747
            .|:.::|.|.|       ..|.|:....|.|:.|..||::.||    :...::|:.|:..:||  
  Fly   703 KQEGVLVVSLERANNLLALWTASADNSQVYLRAALLPNSLTSIRTKALGDFQKPVFNDTFAVP-- 765

  Fly  1748 MSISVPNLTTTSASEVPSTSEVATHTGLLETFAAIARRRTSQGTNIQDNQIMNAEANVNEHGDQN 1812
              |::..|.|.|....     |.|.||..|..             |...||..||.|..:     
  Fly   766 --ITLDKLLTKSLQVT-----VVTMTGQKEEI-------------IGTVQISMAEFNPED----- 805

  Fly  1813 ASGSFLGHSVTSLVKL--ALSSNFHSGL-------LSTAQSYPSLSSNNSENIAPSNPSNTSAGQ 1868
                       |.:|.  .|||.|....       .|.|.:..:::::|    || ||.|.....
  Fly   806 -----------STLKWYNVLSSKFIPSFESLDIPSTSAAAAAAAVAASN----AP-NPGNNREES 854

  Fly  1869 QSASTINHTLTMSLTSTSSDSEQVSLEDFLESCRAPAL-LGDLDDEDDMDEDNDEEENE-DEYE- 1930
            ...|||..:.|.:||     ..|....:..|...|..| ||.|::.:..|:|:|:||.| |:.: 
  Fly   855 SDESTITSSQTSTLT-----RNQAPCMELQEQMAAELLGLGPLNEPECSDDDDDDEEEELDDKQL 914

  Fly  1931 --EVG----NTLLQVMVSRNLLTFMDDEAMENRLVGVTKRKS----WDDEFVLKRQFSALIPAFD 1985
              :||    :::|...:......|.|.|...:|.....|.:.    .||..|.:.|......||.
  Fly   915 VSDVGLMNSSSMLHAYLQNMKQEFADKETNTDRAYLPEKSRGQSQLMDDRPVKRSQTFTPSEAFS 979

  Fly  1986 PRPGRTNVNQTSDLEISPLGAELPKPQQSGGPET------IEQPLLGLKLRGPGIGGIPEVEIDL 2044
            .......:|: ||.:.:......|...|.|..|.      .:.|....||...   .||...:||
  Fly   980 KNRYNCRLNR-SDSDSAMHCGVAPHTFQRGAAERRSLRFHSKAPKSVTKLHHT---HIPRTSLDL 1040

  Fly  2045 S-------------NTDWTIFRAVQELLQCSQLNKLDKFRKIW----EPTYTIVYR---EVSPE- 2088
            .             |......:.::|:||.:..|| |.....|    |....:|.|   ...|| 
  Fly  1041 ELDLQAQHSKLYFLNDQIAKLQNLKEVLQKACENK-DPLVAAWAIENEEFQRLVARADPAKCPEE 1104

  Fly  2089 ----------AQESTCLESEEFPQ-TPDVSS---------KSGASTLSPNSPMHIGFNVADNNLC 2133
                      |:|...|...:.|: .||:.|         :.|.|.  |..|...          
  Fly  1105 RQLQKLLMKTAKEIHKLRKTKVPKGCPDLVSFKEKITFFTRKGLSV--PELPSEF---------- 1157

  Fly  2134 SVDDVLELLTQINGLNQSEIDSDVKEHGVSVLSEDLFISKKITNKLQQQIQDPLVLASNALPNWC 2198
                   .|.:.|.:.:.|.:.|          |:.|.:...|   ...|...||.:||...|..
  Fly  1158 -------TLPEANPIEEEEEEED----------ENEFYNSAET---AIAINTALVASSNRNKNLS 1202

  Fly  2199 ENLNQS-------------CPFLFPFETRQLYFNCTSFG--ASRSIVCLQSQRDVTVERQRIPIM 2248
            |:.:::             .|...|..|.......||..  |:..:|...:|.|.......||:.
  Fly  1203 EHPHRATSGAVPKIPAPVVTPAATPAATPAATPAATSAATPAATPVVSPAAQPDAKPADAPIPVA 1267

  Fly  2249 SPRRDDHEF 2257
            |...:...|
  Fly  1268 SNDAEQQRF 1276

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ufd4NP_609369.1 ANK repeat 393..420 CDD:293786
ANK 396..509 CDD:238125
ANK repeat 422..453 CDD:293786
ANK repeat 455..484 CDD:293786
F5_F8_type_C 1173..1298 CDD:329041 22/174 (13%)
MIB_HERC2 1333..1389 CDD:310955 11/67 (16%)
DamX 1576..>1725 CDD:330571 32/170 (19%)
HECTc 2265..2725 CDD:238033
kibraNP_001034055.1 WW 57..87 CDD:238122 7/29 (24%)
WW 103..132 CDD:278809 6/31 (19%)
C2_Kibra 693..813 CDD:176062 37/157 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5021
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

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