DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ufd4 and Magi

DIOPT Version :9

Sequence 1:NP_609369.1 Gene:Ufd4 / 34378 FlyBaseID:FBgn0032208 Length:2727 Species:Drosophila melanogaster
Sequence 2:NP_001286661.1 Gene:Magi / 37403 FlyBaseID:FBgn0034590 Length:1202 Species:Drosophila melanogaster


Alignment Length:1146 Identity:209/1146 - (18%)
Similarity:357/1146 - (31%) Gaps:437/1146 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly  1780 AAIARRRTSQGTNIQDNQIMNAEANVNEHGDQN---------------------ASGSFLGHS-- 1821
            ||.::..:|.||::..|...:....|..:|:::                     ::.:.:|:|  
  Fly   128 AAASQTLSSAGTDVVGNGSGHGNGTVTGNGEKSGGLAPPGGHHLRPPPPPALKKSASAVIGNSAS 192

  Fly  1822 ---VTSL-------VKLALSSNFHSGLLS-------------TAQSYP--SLSSNNSENIAPSNP 1861
               |.||       .::::.:.|.|||.|             |.:..|  |:...:.||:..:..
  Fly   193 REDVASLSGTSSLNSQMSVHNQFISGLPSNGIGSNGVHGGAATGRGGPPNSILKGSKENLLQNTY 257

  Fly  1862 SNTSAGQQSAST-----------------------------------------INHTLTMSLTST 1885
            .|...|..|..:                                         |:|.     |.|
  Fly   258 YNGETGDSSLGSECGVGDVQHQNHESHDDPGDGLGPLPPKWETAYTERGELYFIDHN-----TGT 317

  Fly  1886 S-------SDSEQVSLEDFLESCRAPALLGDLDDEDDM------DEDNDEEENED---------- 1927
            |       |..::.||||   .|......|....||.|      |..|...:.|:          
  Fly   318 SHWLDPRLSKYQKKSLED---CCEDELPYGWEKIEDSMYGMYFIDHVNRRTQYENPVLEAKRRAA 379

  Fly  1928 ----EYEEVGNTLLQVMVSRN-----LLTFMDDEAMENRLVGVTKRKSWDDEFVLKRQFSALIPA 1983
                :.:::.....|:...|:     |...|..||.|       ..:..:||..:|..:.     
  Fly   380 EQSQQQQQMQQQQQQMQEQRSKTPTALSETMPTEAAE-------AHEQEEDESPMKLPYK----- 432

  Fly  1984 FDPRPGR---TNVNQTSDLEISPLGAELPKPQQSGGPETIEQPLLGLKL---RGPG--IGGIPEV 2040
            |...|..   ..:|.|.......||..:.....|.|.:..|  .|.:|.   .||.  .|.:...
  Fly   433 FTRNPAELQGQRINTTLLKSSRGLGFTIVGSDGSAGGDVEE--FLQIKTVVPNGPAWLDGQLQTG 495

  Fly  2041 EI---------------DLSNTDWTIF---RAVQELLQCSQL-------------------NKLD 2068
            ::               |:.|...:|.   ||..|:.:...|                   .:.|
  Fly   496 DVLVYVNDTCVLGYTHHDMVNIFQSILPGERAALEVCRGYPLPFDPNDPNTEVVTTMAVDGRESD 560

  Fly  2069 KFRKI-WEPTYTIVYREVSPEAQESTCLESEEFPQTPDVSSKSGASTLSPNSP-----------M 2121
            |.|:: .:..|.  :.::|.|..:.|              |.||:..:....|           |
  Fly   561 KQRRLNMDGNYN--FLDLSGEGAKKT--------------SGSGSGFILMKKPEIYTFSIMKGSM 609

  Fly  2122 HIGFNVADN------------NLCSVDDVLELLTQINGLNQSEIDSDVKEHGVSV-LSEDLFISK 2173
            ..||.:||:            |.|:.....::|.:|||||...     |.|...| |.::...:.
  Fly   610 GFGFTIADSACGQIVKKILDRNCCTQLMEGDVLLEINGLNVRN-----KPHFYVVELLKECSQTT 669

  Fly  2174 KITNKLQQQIQDPLVLASNALPNWCENLNQSCPFLFPFETRQLYFNCTSFGASRS---IVCLQSQ 2235
            ....|:|:...||  .|:|.|    ..|||      .....:|..|....|..||   ...|.|.
  Fly   670 PTAVKIQRTPPDP--PANNTL----AQLNQ------VGNVAKLRKNFVGSGLFRSKTPTADLYST 722

  Fly  2236 --RDVTVERQRIPIMSPRRDDHEFRIGRLKHERVKVPRNEDLLMWAMQVMKTHCNRKSVLEVEFL 2298
              ::|...|.:.|::..||.    |:      :::.|.||                        :
  Fly   723 QVKEVLPMRPKTPLVDTRRS----RV------QIQSPNNE------------------------V 753

  Fly  2299 DEEGTGLGPTLEFYALVAAEIQRSDLCMWLCDDDLGEDTENSTQSAEGNSKPVGYY-----VNRR 2358
            |:||.|           ||..:|..|.:         .|:..:.|:......:.|.     ::|.
  Fly   754 DDEGDG-----------AAAAERKPLQL---------QTQGKSNSSLQELDDIPYMDPYPKISRL 798

  Fly  2359 EH-------------GIF-------PAPLP---QNSEICENVLKYFWFFGVFVAKVLQDMRLVD- 2399
            ..             ||:       |.|||   ..|..|.:.....:..|.||......|.... 
  Fly   799 SERLAEVTLQGDANGGIYGMPPSMQPLPLPLAHHESCYCYDCQAQRYRPGYFVQAQQAAMSGTTG 863

  Fly  2400 --IPLSTSFLQLLCHNKVLSRNLQKVISDR--------------------RNGDLSVVSEDSDIV 2442
              .||.|:.||    |:.:.|.:.:::|||                    |||.|..||||:|..
  Fly   864 QYSPLQTAHLQ----NERIQRRVNELLSDRRRVGFANLDPPQQMQHSPSWRNGALLDVSEDADQC 924

  Fly  2443 ETCTKLLRTDS-------------------------------NKSNAFGGILSLENLKEIDPTRY 2476
            |.....|...:                               .:.|....|||::.:..::.:.:
  Fly   925 ELTEVTLERQALGFGFRIVGGTEEGSQVTVGHIVPGGAADQDQRINTGDEILSIDGINVLNSSHH 989

  Fly  2477 QFLQEMQNLLLRKQSIEFDDTISAEKKHELINELKLQTQ------NGLEVSLEDLALTFTYLPSS 2535
            :.:..:....||.|.    ..|...::..|:.:..:.||      :.:....|:....|..:.||
  Fly   990 KVVSLVGESALRGQV----TMILRRRRTPLLQQAPVSTQLRRYPYDVIVSRHENEGFGFVIISSS 1050

  Fly  2536 S-IYGYTQAELLPNGSSVN-----------VTIDNLE----AYCELLMNFILQDGIAQQMKAFSD 2584
            : .||.|..:|:| ||..:           |.::.:|    ::.: ::|.|.:.|:..::..   
  Fly  1051 NHYYGSTIGKLIP-GSPADRCGELKVGDRIVAVNRIEIAGMSHGD-VVNLIKESGLHVRLTI--- 1110

  Fly  2585 GFNEVFPLKK-----------LAAFTPSEARMMICGEQFPH 2614
                ..|||:           :::.||.:|...:...|..|
  Fly  1111 ----GVPLKEGGPSPGGSSVGVSSNTPLQASPSLLKAQLSH 1147

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ufd4NP_609369.1 ANK repeat 393..420 CDD:293786
ANK 396..509 CDD:238125
ANK repeat 422..453 CDD:293786
ANK repeat 455..484 CDD:293786
F5_F8_type_C 1173..1298 CDD:329041
MIB_HERC2 1333..1389 CDD:310955
DamX 1576..>1725 CDD:330571
HECTc 2265..2725 CDD:238033 83/465 (18%)
MagiNP_001286661.1 WW 294..323 CDD:278809 5/33 (15%)
WW 342..372 CDD:238122 7/29 (24%)
PDZ 443..534 CDD:214570 18/92 (20%)
DegQ <455..534 CDD:223343 16/80 (20%)
PDZ_signaling 606..668 CDD:238492 17/66 (26%)
PDZ 925..1011 CDD:214570 10/89 (11%)
PDZ_signaling 1029..1110 CDD:238492 16/82 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5021
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

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