Sequence 1: | NP_609369.1 | Gene: | Ufd4 / 34378 | FlyBaseID: | FBgn0032208 | Length: | 2727 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001259898.1 | Gene: | Su(dx) / 33379 | FlyBaseID: | FBgn0003557 | Length: | 949 | Species: | Drosophila melanogaster |
Alignment Length: | 1207 | Identity: | 232/1207 - (19%) |
---|---|---|---|
Similarity: | 382/1207 - (31%) | Gaps: | 440/1207 - (36%) |
- Green bases have known domain annotations that are detailed below.
Fly 1668 PVPCTNVPVGGKKTPKAQALINPDNANQ--KQIIVTSEEFPTKSSKKPSVTLKPAQQPNAVLSIV 1730
Fly 1731 DIKEQ-----------PISNENVSVPSQMSISVPNLTTTSASEVPSTSEVATHTGLLETFAAIAR 1784
Fly 1785 RRTSQGTNIQDNQIMNAEANVNEHGDQNASGSFLGHSVTSLVKLALSSN----------FHSGL- 1838
Fly 1839 --LSTAQSYPSLSSNNS----ENIAPSNPSNTSAGQQSASTINHTLTMSLTSTSSDSEQVSLE-- 1895
Fly 1896 ------DFLESCRAPALLGDLDDEDDMDEDNDEEENEDEYEEVGNTLLQVMVSRNLLTFMDDEAM 1954
Fly 1955 ENRLVGVTKRKSWDDEFVLKRQFSALIPAFDPRPGR----------TNVNQTSDLEISPLGAELP 2009
Fly 2010 K-------PQQSGGPETIEQPLLGL---------------------------------------- 2027
Fly 2028 ----------------KLRGPGIGGIPEVEIDLSNTDWTIFRAVQELLQCSQLNKLDKFRKIWEP 2076
Fly 2077 TYTIVYREVSPEAQESTCLESEEFPQTPDVSSKSGASTLSPNSPMHIGFN---VADNNLCSVDDV 2138
Fly 2139 LELLTQINGLNQSEIDSDVKEHG--VSVLSED----------------LFISKKITNKLQQQIQD 2185
Fly 2186 PLVLASN------ALPNWCENLNQSCPFLFPFETRQLYFNCTSFGASRSIVCLQSQRDVTVERQR 2244
Fly 2245 IPIMSPRRDDHEFRIGRLKHERVKVPRNEDLLMWAMQVMKTHCNRKSVLEVEFLDEEGTGL-GPT 2308
Fly 2309 LEFYALVAAEIQRSDLCMWLCDDDLGEDTENSTQSAEGNSKPVGYYVNRREHG--IFPAPLPQNS 2371
Fly 2372 EICENVLKYFWFFGVFVAKVLQDMRLVDIPLSTSFLQLLCHNKVLSRNLQKVISDRRNGDLSVVS 2436
Fly 2437 EDSDIVETCTKLLRTDSNKSNAFGGILSLENLKEIDPTRYQFLQEMQNLLLRKQSIEFDDTISAE 2501
Fly 2502 KKHELINELKLQTQNGLEVSLEDLALTFTYLPSSSIYGYTQAELLPNGSSVNVTIDNLEAYCELL 2566
Fly 2567 MNFILQDGIAQQMKAFSDGFNEVFPLKKLAAFTPSEARMMICGEQ---FPHWSREDIISYTEPKL 2628
Fly 2629 GYNKDSPGFQRFVNVLLSMSGDERKAFLQFTTGCSSLPPGGLANL----HPRLTVVRKVDAGVGS 2689
Fly 2690 Y-PSVNTCVHYLKLPDYPTEEIMKERLLTATKE-KGF 2724 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Ufd4 | NP_609369.1 | ANK repeat | 393..420 | CDD:293786 | |
ANK | 396..509 | CDD:238125 | |||
ANK repeat | 422..453 | CDD:293786 | |||
ANK repeat | 455..484 | CDD:293786 | |||
F5_F8_type_C | 1173..1298 | CDD:329041 | |||
MIB_HERC2 | 1333..1389 | CDD:310955 | |||
DamX | 1576..>1725 | CDD:330571 | 16/58 (28%) | ||
HECTc | 2265..2725 | CDD:238033 | 103/472 (22%) | ||
Su(dx) | NP_001259898.1 | C2_E3_ubiquitin_ligase | 48..173 | CDD:175988 | 34/161 (21%) |
WW | 364..396 | CDD:197736 | 0/31 (0%) | ||
WW | 397..426 | CDD:278809 | 6/30 (20%) | ||
WW | 478..509 | CDD:197736 | 8/40 (20%) | ||
WW | 522..554 | CDD:197736 | 4/34 (12%) | ||
HECTc | 594..946 | CDD:238033 | 107/499 (21%) | ||
HECTc | 620..946 | CDD:214523 | 99/447 (22%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C45447004 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG5021 | |
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.830 |