Sequence 1: | NP_609369.1 | Gene: | Ufd4 / 34378 | FlyBaseID: | FBgn0032208 | Length: | 2727 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_608388.2 | Gene: | HERC2 / 33035 | FlyBaseID: | FBgn0031107 | Length: | 4912 | Species: | Drosophila melanogaster |
Alignment Length: | 2756 | Identity: | 519/2756 - (18%) |
---|---|---|---|
Similarity: | 850/2756 - (30%) | Gaps: | 1033/2756 - (37%) |
- Green bases have known domain annotations that are detailed below.
Fly 94 SIDGAIKAICNHLVV-ADLSSRTSRDLAEQCIKVLELICTREAGAVF---EG-----GGLNC--- 146
Fly 147 -----VLSFIR----DCGSQVHKDTLHSAMSVVSRLCT----------KVEPNTPCIQNC-VESL 191
Fly 192 STLLQHE---DPMVSDGALKCFASVADRFTRKW-------VDPAPL-AEYGLTTELLKRLQSV-- 243
Fly 244 -GGNTHSSLTAAGTQ------------------PT-----------SSSQPAATTNSDAINENVA 278
Fly 279 GT----------ATISNSTKVKSSDAAASPQSISTTISLLSTLCRGSPSITHDILRSQLADALER 333
Fly 334 ALQGDERCVLD--CMRFADLLLLLLFEGRQALNRGSNNPNQGQLAPRPRRNNTNTDRTHRQLIDC 396
Fly 397 IRSK------DSEALREAI--ESGGIDVNCMDDVGQTLLNWASAFGTLEMVEYLCEKGADVNKGQ 453
Fly 454 RSSSLHYAACFGRPAIAKILLKFGAYPDLRDEDGKTPLDKARERLDDGHREVAAILQSPGEWMSP 518
Fly 519 DHSLLNKDGKKYTLMEPRGDPE--------MAPIYLKVLLP-------------IFCR----TFL 558
Fly 559 GSMLGSVRRA-----SLALIKK------IVQYAYPTVLQSL----------------------SE 590
Fly 591 TSFSEDAA-----STSGQNGG-----------------NLLI----------------------E 611
Fly 612 VIASVLDNEDDGDGHLIVLNIIEEIMCKTQEEFLDHFARLGVFAKVQALMDTDAEELYVQLPGT- 675
Fly 676 -----VEEPAAAQRSSTSVVVAPRPTSDDPMEDAKEILQGKPYHWREWSICRGRDCLYVWSDSVA 735
Fly 736 LELSNGSNGWFRFIIDGKLATMYSSGSPEN--GNDSSE-------------NRGE---------F 776
Fly 777 LEKLMRARSCVIAGVVSQPILPTASALRLVVGNWVLQSQ---KTNQLQIHN---TEGHQVTVLQD 835
Fly 836 DLPGFIFESNRGTKHTFSAETVLGPDFASGWSTAKKKRNKSKTEGQKFQVRNLSREIYNKYFKSA 900
Fly 901 QIIPRGAVAILTDIVKQIELSFEEQHMAPNGNWETTLTDALMKLSQLIHEDGVVSAYEMHSSGLV 965
Fly 966 QALVAVLSVNHWETNSPRCKRNKMQKQRVSVFKKCILEDNVESATNKPRTKSTASILIQKL---- 1026
Fly 1027 ----------VSVLESTEKLPVYLYDSPCTGYSLQILQKRLRFRLERAECESTLFDRSGRTLKME 1081
Fly 1082 PLATIGQLSKYLLKMVA----KQWYDLD---RSTYFYLKKIREHRTATVFTHSFDFDEEGLLFYI 1139
Fly 1140 GSNAKTCDWVNPAQYGL--------VQVTSSEGKTLPYGKLEDILSRDSISLNCHTKDNKKAWFA 1196
Fly 1197 IDLGVYIIPTAYTLRHARGYGRSALRNWLLQGSKDGSTWTTLSTHVDDKSLVEPGSTATWPINCA 1261
Fly 1262 TDDSVWYRHIRIQQNGRNASGQTHYLSLSGFEIYGRVVGVADDIGKSVKEAEAKTRRE------- 1319
Fly 1320 --------RRQIRAQL------KHMTTGARVIRGVDWRWEEQDG--CAEGTITGEI-HNGWIDVK 1367
Fly 1368 WDHGVRNSYRMGAEGKYDLKLADCEYLSAFDGNQSMGSASTAAKPSEKGGNTLTSRKSSSTPSLP 1432
Fly 1433 EATEKNQNPEGASNQTVSADNLAWKQTVETIAENVFASAKTQIISNQLAMNTSSSREARAKHKES 1497
Fly 1498 GTNQMHKDNISGPSPLSRELEH------ISDLSAINNSMPAINSSNVSDLAT---ISENLSLTEL 1553
Fly 1554 SKEN------------ICRVLTPSYKPAES-----------VTASQSSSHPDVQSSSPRENDIKN 1595
Fly 1596 ISNIEENNKMNANNSVNKISKDLLANL-RTSNIAGCPPV----------------------TQLS 1637
Fly 1638 TEALEMID----------KMRDGVDMIRNMSNSILSTDTFPVPCTNVPVGG-------------- 1678
Fly 1679 ------------KKTPKAQALIN----------PDNANQKQIIVTSEEFPTKSSKKPSVTLKPAQ 1721
Fly 1722 Q---------------------------PNAVLSIVD-------------IKEQPISNENVSVPS 1746
Fly 1747 QMSISVPNLTTTSASEVP---STSEVATHT-GLLETFAAIARRRTSQGTNIQDN----------- 1796
Fly 1797 --------QIMNAEANVNEHGDQNAS-----------GSFLGHSVT-SLVKLALSS-NFHSGLLS 1840
Fly 1841 TAQ-------SYPSLSSNN-SENIAPSNPSNTSAGQQSASTINHTLTMSLTSTSSDSEQVSLEDF 1897
Fly 1898 LESCRAPALLGDLDDEDDMDEDNDEEENED--------------------EYEEV-----GNTLL 1937
Fly 1938 QVMVSRNLLTFMDDEAMENRLVGVTKRKSWDDE-------FVLKRQFSALIPAFDPRP------- 1988
Fly 1989 -----------------------GRTNVNQTSDLEISPLGAELP-KPQQSGGPETIE----QPLL 2025
Fly 2026 G-LKLRGPGIGGIPEVEIDLSNTDWTIFRAVQELL-------------------------QCSQL 2064
Fly 2065 NKLDKFRKIWEPTYTIVYREVSP----------EAQESTCLES-EEFPQTPDVSSKSGAS--TLS 2116
Fly 2117 PNSPMHIGFNVADNNLCSVDDVLELLTQINGLNQSEIDSDVKEHGVSVLSEDLFISKKITNKLQQ 2181
Fly 2182 QIQDPLVLASNALPNWCENLNQSCPFLFPFETRQLYFNCTSFGASRSIVCLQSQRDVTVERQRIP 2246
Fly 2247 --IMSPRRDDHEFRIGRLKHERVKVP 2270 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Ufd4 | NP_609369.1 | ANK repeat | 393..420 | CDD:293786 | 9/34 (26%) |
ANK | 396..509 | CDD:238125 | 22/120 (18%) | ||
ANK repeat | 422..453 | CDD:293786 | 5/30 (17%) | ||
ANK repeat | 455..484 | CDD:293786 | 2/28 (7%) | ||
F5_F8_type_C | 1173..1298 | CDD:329041 | 27/124 (22%) | ||
MIB_HERC2 | 1333..1389 | CDD:310955 | 30/58 (52%) | ||
DamX | 1576..>1725 | CDD:330571 | 32/244 (13%) | ||
HECTc | 2265..2725 | CDD:238033 | 4/6 (67%) | ||
HERC2 | NP_608388.2 | RCC1 | 638..683 | CDD:278826 | |
RCC1 | 687..737 | CDD:278826 | 9/37 (24%) | ||
RCC1 | 740..787 | CDD:278826 | 14/52 (27%) | ||
RCC1 | 790..841 | CDD:278826 | 15/55 (27%) | ||
RCC1_2 | 828..857 | CDD:290274 | 6/30 (20%) | ||
Cyt-b5 | 1290..1363 | CDD:278597 | 15/76 (20%) | ||
MIB_HERC2 | 1928..1987 | CDD:284184 | 30/58 (52%) | ||
UBA_HERC2 | 2515..2559 | CDD:270585 | 7/43 (16%) | ||
Cul7 | 2624..2699 | CDD:288381 | 12/89 (13%) | ||
APC10-HERC2 | 2762..2932 | CDD:176485 | 36/203 (18%) | ||
RCC1 | 3037..3088 | CDD:278826 | |||
RCC1 | 3091..3140 | CDD:278826 | |||
RCC1 | 3144..3194 | CDD:278826 | |||
RCC1 | 3197..3246 | CDD:278826 | |||
RCC1 | 3250..3298 | CDD:278826 | |||
RCC1 | 3302..3350 | CDD:278826 | |||
RCC1_2 | 4136..4166 | CDD:290274 | |||
RCC1 | 4154..4203 | CDD:278826 | |||
RCC1 | 4206..4257 | CDD:278826 | |||
RCC1 | 4260..4309 | CDD:278826 | |||
RCC1 | 4312..4360 | CDD:278826 | |||
RCC1 | 4364..4413 | CDD:278826 | |||
HECTc | 4509..4880 | CDD:238033 | |||
HECTc | 4553..4878 | CDD:214523 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C45446991 | |
Domainoid | 1 | 1.000 | 69 | 1.000 | Domainoid score | I6289 |
eggNOG | 1 | 0.900 | - | - | E1_COG5021 | |
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.830 |