Sequence 1: | NP_609369.1 | Gene: | Ufd4 / 34378 | FlyBaseID: | FBgn0032208 | Length: | 2727 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001101688.1 | Gene: | Hecw2 / 316395 | RGDID: | 1593244 | Length: | 1578 | Species: | Rattus norvegicus |
Alignment Length: | 1990 | Identity: | 372/1990 - (18%) |
---|---|---|---|
Similarity: | 625/1990 - (31%) | Gaps: | 790/1990 - (39%) |
- Green bases have known domain annotations that are detailed below.
Fly 1061 LERAECESTLF---DRSGRTLKMEPLATIGQLSKYLLKMVAKQWYDLDRSTYFYLKKIREHRTAT 1122
Fly 1123 VFTHSFDFDEEGLLFYIGSNAKTCDW-VNPAQY-----------------GLVQVTS-------- 1161
Fly 1162 -----SEG-KTLPYGKLEDILSRDSISLNCHTKDNKKAWFAIDLGVYIIPTAYTLRHARGYGRSA 1220
Fly 1221 LRNWLLQGSKDGSTWTTLSTHVDDKSLVEPGSTATWPINCA-------------TDDSVWYRHIR 1272
Fly 1273 IQQNGRNASGQTHYLSLSGFEIYGRVVGVADDIGKSVKEAEAKTR-----------------RER 1320
Fly 1321 RQIRAQLKHMTTGARV----IRG-VDWRWE-----EQDGCAE--GTITGEIH------------- 1360
Fly 1361 -------------NGWI--DVKWDHGVRNSYRMGA-------------------EGKYDLKLADC 1391
Fly 1392 EYLSAFD--GNQSMGSASTAAKP------------------------------------------ 1412
Fly 1413 SEKGGNTLTSRKSS------STPSLPEATEKNQNPEGASNQTVS----ADNLAWKQTVE------ 1461
Fly 1462 -TIAENVFASAKTQIISNQLAMNTSSSREARAKHKESGTNQMHKDNISGPSPLSRELEHISDLSA 1525
Fly 1526 INNSMPAINSSNVSDLATISENLSLTELSKENICRVLTPSYKPAESVTASQSSSHPDVQSSSPRE 1590
Fly 1591 NDIKNISNIEENNKMNANNSVNKISKDLLANLRTSNIAGCPPVTQLSTEALEMIDKMRDGVDMIR 1655
Fly 1656 NMSNSILSTDTFPVPCTNVPVGGKKTPKAQALINPDNANQKQIIVTSEEFPTKSSKKPSVTLKPA 1720
Fly 1721 QQPNAVLSIVDIKEQPISNENVSVPSQM-SISVPN-------LTTTSASEVPSTSEVATHTGLLE 1777
Fly 1778 TFAAIARRRTSQGTNIQ--------DNQIMNAEANVNEHGDQNASGSFLGHSVTSLVKLALSSNF 1834
Fly 1835 HSGLLSTAQSYPSLSSNNS--ENIAPSNPSNTSAGQQS------ASTINHTLTMS---------- 1881
Fly 1882 LTSTSSDSEQVSLEDFLESCRAPALLGDLDDE-----DDMDEDNDEEENEDEYEEVGNTLLQVMV 1941
Fly 1942 SRNLLT-----------------------------FMDDEAMENRLVGVTKRKSWDDEFVLKRQF 1977
Fly 1978 SALIPAF----------------------------------DPRPGRTNVNQTSDL--------E 2000
Fly 2001 ISPLGAELPKPQQSGGPETIEQPLLGLKLRGPGIGGIPEVEIDLSNTDWTIFR-AVQELLQCSQL 2064
Fly 2065 NKLDKFRKIWEPTYTIVYREVSPE-AQESTCLESEEFPQTPDVSSKSGASTLSPNSPMHIGFNVA 2128
Fly 2129 DNNLCSVDDVLELLTQINGLNQSEIDSDVKEHGVSVLSEDLFISKKITNKLQQQIQDPLVLASNA 2193
Fly 2194 LPNWCENLNQSCPFLFPFETRQLYFNCTSFGASRSIVCLQSQRDVTVERQRIPIMSPRRDDHEFR 2258
Fly 2259 I----------------GRLKHERVKVPRNEDLLMWAMQVMKTHCNR---KSVLEVEFLDEEGTG 2304
Fly 2305 L-GPTLEFYALVAAEIQRSDLCMWLCDDDLGEDTENSTQSAEGNSKPVGYYVNRREHGIFPAPLP 2368
Fly 2369 QNSEICENVLKYFWFFGVFVAKVLQDMRLVDI----PLSTSFLQLLCHNKVLSRNLQKVISDRRN 2429
Fly 2430 GDLSVVSEDSDIVETCTKLLRTDSNKSNAFGGILSLENLKEIDPTRYQFLQEMQNLLLRKQSIEF 2494
Fly 2495 DDTISAEKKHELINELKLQTQNGLEVSLEDLALTFTYLPSSSIYG-YTQAELLPNGSSVNVTIDN 2558
Fly 2559 LEAYCELLMNFILQDGIAQQMKAFSDGFNEVFPLKKLAAFTPSEARMMICGE---QFPHWSREDI 2620
Fly 2621 ISYTEPKLGYNKDSPGFQRFVNVLLSMSGDERKAFLQFTTGCSSLPPGGLANLH----PRLTVVR 2681
Fly 2682 KVDAGVGSYPSVNTCVHYLKLPDYPTEEIMKERLLTATKE 2721 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Ufd4 | NP_609369.1 | ANK repeat | 393..420 | CDD:293786 | |
ANK | 396..509 | CDD:238125 | |||
ANK repeat | 422..453 | CDD:293786 | |||
ANK repeat | 455..484 | CDD:293786 | |||
F5_F8_type_C | 1173..1298 | CDD:329041 | 19/137 (14%) | ||
MIB_HERC2 | 1333..1389 | CDD:310955 | 20/114 (18%) | ||
DamX | 1576..>1725 | CDD:330571 | 24/148 (16%) | ||
HECTc | 2265..2725 | CDD:238033 | 108/473 (23%) | ||
Hecw2 | NP_001101688.1 | HECW_N | 45..162 | CDD:406866 | 25/126 (20%) |
C2_NEDL1-like | 185..321 | CDD:176073 | 29/198 (15%) | ||
MDN1 | <396..741 | CDD:227596 | 90/474 (19%) | ||
NESP55 | <464..632 | CDD:115071 | 44/202 (22%) | ||
WW | 815..844 | CDD:395320 | 7/28 (25%) | ||
HECW1_helix | 921..987 | CDD:408233 | 3/65 (5%) | ||
WW | 993..1024 | CDD:197736 | 2/30 (7%) | ||
HECTc | 1222..1576 | CDD:238033 | 110/476 (23%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG5021 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.900 |