Sequence 1: | NP_609369.1 | Gene: | Ufd4 / 34378 | FlyBaseID: | FBgn0032208 | Length: | 2727 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001100531.1 | Gene: | Smurf2 / 303614 | RGDID: | 1310067 | Length: | 748 | Species: | Rattus norvegicus |
Alignment Length: | 833 | Identity: | 177/833 - (21%) |
---|---|---|---|
Similarity: | 288/833 - (34%) | Gaps: | 242/833 - (29%) |
- Green bases have known domain annotations that are detailed below.
Fly 1967 WDDEFVLKRQFSALIPAFDPRPGRTNVNQTSD-----LEISPLGAELPKPQQSGGPETIE-QPLL 2025
Fly 2026 GLKLRGP-GIGGIPEVEIDLSN-------TDWTIFRAVQELLQCSQLNKLDKFRKIWE-PTYTIV 2081
Fly 2082 YREVSPEAQESTCLESEEFPQTPDVSSKSGASTLSP-------NSPMHIGFNVADNNLCSVDDVL 2139
Fly 2140 ELLTQINGLNQSEIDSDVKEHGVSVLSEDLFISKKITNKLQQQIQDPLVLASNALPNWCENLNQS 2204
Fly 2205 CPFLFPF---------ETRQLYF-----NCTSF---GASRSIVCLQSQRDVTVERQRIPIMSPRR 2252
Fly 2253 DDHE-FRIGRLKH---ERVKVPRNEDLLMWAMQVMKTHC----NRKSVLE--------------- 2294
Fly 2295 ----VEFLDEEGTGLGPTLEFYALVAAEIQRSDLCMWLCDDDLGEDTENSTQSAEGNSKPVGYYV 2355
Fly 2356 NRREHGIFPAPLPQNSEICENVLKYFWFFGVFVAKVLQDMRLVDIPLSTSFLQLLCHNKVLSRNL 2420
Fly 2421 QKVISDRRNGDLSVVSEDSDIVETCTKLLRTDSNKSNAFGGILSLENLKEIDPTRYQFLQEMQNL 2485
Fly 2486 LLRKQSIEFDDTISAEKKHELINELKLQTQNGLEVSLEDLALTFTYLPSSSIYG-YTQAELLPNG 2549
Fly 2550 SSVNVTIDNLEAYCELLMNFILQDGIAQQMKAFSDGFNEVFPLKKLAAFTPSEARMMICG---EQ 2611
Fly 2612 FPHWSREDIISYTEPKLGYNKDSPGFQRFVNVLLSMSGDERKAFLQFTTGCSSLPPGGLANLH-- 2674
Fly 2675 --PRLTVVRKVDAGVGSYPSVNTCVHYLKLPDYPTEEIMKERLLTATKEK-GF 2724 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Ufd4 | NP_609369.1 | ANK repeat | 393..420 | CDD:293786 | |
ANK | 396..509 | CDD:238125 | |||
ANK repeat | 422..453 | CDD:293786 | |||
ANK repeat | 455..484 | CDD:293786 | |||
F5_F8_type_C | 1173..1298 | CDD:329041 | |||
MIB_HERC2 | 1333..1389 | CDD:310955 | |||
DamX | 1576..>1725 | CDD:330571 | |||
HECTc | 2265..2725 | CDD:238033 | 107/492 (22%) | ||
Smurf2 | NP_001100531.1 | C2_Smurf-like | 13..137 | CDD:176028 | 12/66 (18%) |
PRP40 | 155..>236 | CDD:227435 | 18/86 (21%) | ||
WW | 159..188 | CDD:395320 | 7/31 (23%) | ||
WW | 252..283 | CDD:197736 | 8/49 (16%) | ||
WW | 298..330 | CDD:197736 | 6/31 (19%) | ||
HECTc | 393..745 | CDD:238033 | 100/468 (21%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.000 |