Sequence 1: | NP_609369.1 | Gene: | Ufd4 / 34378 | FlyBaseID: | FBgn0032208 | Length: | 2727 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_038952600.1 | Gene: | Nedd4l / 291553 | RGDID: | 735047 | Length: | 1259 | Species: | Rattus norvegicus |
Alignment Length: | 1547 | Identity: | 292/1547 - (18%) |
---|---|---|---|
Similarity: | 474/1547 - (30%) | Gaps: | 572/1547 - (36%) |
- Green bases have known domain annotations that are detailed below.
Fly 1298 VVGVADDIGKSVKEAEAKTRRERRQIRAQLKHMTTGARVIRGVDWRWEEQDGCAEGTITGEIHNG 1362
Fly 1363 WIDVKW--DHGVRNSYRMGAEGK----YDLKLADCEYLSAFDGNQSMGSASTAAKPSEKGGN--- 1418
Fly 1419 --TLTSRKSSSTPSLPEA-----TEKNQNPEGASNQTVSADNLAWKQTVETIAENVFASAKTQII 1476
Fly 1477 SNQ--LAMNTSSSREARAKHKES-------GTNQMHKDNISG--PSPLS---------------- 1514
Fly 1515 ----RELEHISDLSAI----------NNSMPAINSSNVSDL----ATISENLSLTELSKENICRV 1561
Fly 1562 LTPSYKPAESV---------------TASQSSSHPDVQSSSPRENDIKNISNIEENNKMNANNSV 1611
Fly 1612 NKISKDLLANLRTSNIAGCPPVTQLSTEALEMIDKMRDGVDMIRNMSNSILSTDTFPVPCTNVPV 1676
Fly 1677 GGKKTPK-------AQALINPDNANQKQIIVTSEEFPTKSSKKPSVTLKPAQQPNAVLSIVDIKE 1734
Fly 1735 QPISNENVSVPSQMSISVPNLTTTSASEVPSTSEVATHTGLLETFAAIARRRTSQGTNIQDNQIM 1799
Fly 1800 NAEANVNEHGDQNASGSFLGHSVTSLVKLALSSNFHSGLLSTAQSYPSLSSNNSEN--IAPS--N 1860
Fly 1861 PSNTSAGQQSASTINHTLTMSLTSTSSDSEQVSLEDFLESCRAPALLGDLDDEDDMDEDNDEEEN 1925
Fly 1926 EDEYEEVGNTLLQVMVSRNLLTFMDDEAMENRLVGVTKRKSWDDEFVLKRQFSALIPAFDPRPGR 1990
Fly 1991 TNVNQTSDLEISPLGAELPKPQQSGGPETIEQPLL--GLKLR-GPGIGGIPEVEIDLSNTDWTIF 2052
Fly 2053 RAVQELLQCSQLNKLDKFRKIWEPTYTIVYREVSPEAQESTCLESEEFPQTPDVSSKSGASTLSP 2117
Fly 2118 N--SPMHIGFNV---ADNNLCSVDDVLELLTQINGLNQSEIDSDVKEHGVSVLSEDLFISKKITN 2177
Fly 2178 KLQQQIQDPLVLASNALPNWCENLNQSCPFLFPFETRQLYFNCTSFGASRSIVCLQSQRDVTVER 2242
Fly 2243 QRIPIMSPRRDD---HEFRIGRLKHERVKVPRNEDLLMWAMQVMKTHCNRKSVLEVEFLDEEGTG 2304
Fly 2305 LGPTL-EFYALVAAEIQRSDLCMWLCDDDLGEDTENSTQSAEGNSKPVGYYVNRREHGIF----- 2363
Fly 2364 ---PAPLPQNSEIC-ENVLKYFWFFGVFVAKVLQDMRLVDIPLSTSFLQLLCHNKVLSRNLQKVI 2424
Fly 2425 SDRRNGDLSVVSEDSDIVETCTKLLRTDSNKSNAFGGILSLENLKEIDPTRYQFLQEMQNLLLRK 2489
Fly 2490 QSIEFDDTISAEKKHELINELKLQTQNGLEVSLEDLALTFTYLPSSSIYGYT-QAELLPNGSSVN 2553
Fly 2554 VTIDNLEAYCELLMNFILQDGIAQQMKAFSDGFNEVFPLKKLAAFTPSEARMMICG---EQFPHW 2615
Fly 2616 SREDIISYTEPKLGYNKDSPGFQRFVNVLLSMSGDERKAFLQFTTGCSSLPPGGLANLH----PR 2676
Fly 2677 LTVVRKVDAGVGS---YPSVNTCVHYLKLPDYPTEEIMKERLLTATKE-KGF 2724 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Ufd4 | NP_609369.1 | ANK repeat | 393..420 | CDD:293786 | |
ANK | 396..509 | CDD:238125 | |||
ANK repeat | 422..453 | CDD:293786 | |||
ANK repeat | 455..484 | CDD:293786 | |||
F5_F8_type_C | 1173..1298 | CDD:329041 | 292/1547 (19%) | ||
MIB_HERC2 | 1333..1389 | CDD:310955 | 13/61 (21%) | ||
DamX | 1576..>1725 | CDD:330571 | 33/155 (21%) | ||
HECTc | 2265..2725 | CDD:238033 | 105/482 (22%) | ||
Nedd4l | XP_038952600.1 | C2 | <365..418 | CDD:417471 | 8/52 (15%) |
WW | 463..489 | CDD:395320 | 3/27 (11%) | ||
WW | 653..682 | CDD:395320 | 3/35 (9%) | ||
WW | 766..796 | CDD:238122 | 13/65 (20%) | ||
WW | 815..865 | CDD:197736 | 13/65 (20%) | ||
HECTc | 926..1255 | CDD:214523 | 102/471 (22%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG5021 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.900 |