DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ufd4 and SPAC12B10.01c

DIOPT Version :9

Sequence 1:NP_609369.1 Gene:Ufd4 / 34378 FlyBaseID:FBgn0032208 Length:2727 Species:Drosophila melanogaster
Sequence 2:NP_594633.2 Gene:SPAC12B10.01c / 2541575 PomBaseID:SPAC12B10.01c Length:1647 Species:Schizosaccharomyces pombe


Alignment Length:1971 Identity:443/1971 - (22%)
Similarity:709/1971 - (35%) Gaps:592/1971 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly  1007 ESATNKPRTKSTASILIQKLVSVLESTEKLPVYLYDSPCTGYSLQILQKRLRFRLERAECESTLF 1071
            ||.||.|       :.|..|.|..::..:|.        |...|...:||      ||       
pombe    19 ESITNSP-------VFIPNLRSKSDNKHRLN--------TSEELPFTKKR------RA------- 55

  Fly  1072 DRSGRTLKMEPLATIGQLSKYLLKMVAKQWYDLDRSTYFYLKKIREHRTATVFTHSFDFDEEGLL 1136
              :...||||..|.|.:...             .:|..|.......|          ||.|  ||
pombe    56 --TKHFLKMEVSAKISEPPS-------------SKSVEFGRHLNMRH----------DFSE--LL 93

  Fly  1137 FYIGSNAKTCDW--VNPAQYGLVQVTSSEGKTLPYGKLEDILSRDSISLNCHTKD---NKKAWFA 1196
            ....:.:||..:  .|....|..|:..|:...||..|..|||:.....|:..:.|   :|||  .
pombe    94 EQPLTTSKTRVFKSFNEKLKGKPQLVKSDKGVLPLNKQSDILNSYERVLSNASVDSALDKKA--E 156

  Fly  1197 IDLGVY----IIPTAYTLRHARG---YGRSALRNWLLQGSK------DGSTWTTLSTHVDDKSLV 1248
            :|:..:    :.|...|.....|   :|.|.........|.      |.|.:.....||.|.:  
pombe   157 VDIIPFDKSVMEPKNITFNDKSGLTKFGNSNSYETTYSDSSNYHTSTDSSQYNDQDDHVYDDT-- 219

  Fly  1249 EPGSTATWPINCATDDSVWYRHIRIQQNGRNASGQTHYLSLSGFEIYGRVVGV----ADDIGKSV 1309
                      |..|||.:        .|......:    |.||.|.|.|...|    .:|..::.
pombe   220 ----------NDGTDDDI--------NNNEYKDDE----SSSGSESYERDEDVDEEEEEDDDENN 262

  Fly  1310 KEAEAKTRRERRQIRAQLKHMTTGARVIR--------GVDWRWEEQDGCAEGTITGEIHNGWIDV 1366
            .|.:.:...|..::|::.......|.||.        |:    ||.|........|.|..|....
pombe   263 DEGDDEDENENDELRSENGSPNPSAAVINEQENMNMSGI----EEYDETNLLNELGRIRRGNQFQ 323

  Fly  1367 KWDHGVRNSYRMGAEGKYDLKLADCEYL--SAFDGNQSMGSASTAAKPSEKGGNTLTSRKSSSTP 1429
            .....:.:|..:......|:.|....|.  |:|...:|..||     |..:.|..|...|..|.|
pombe   324 SLASSILSSGNLENSDDEDVSLGPQTYRFNSSFHPFRSAFSA-----PGVQFGRLLEGIKDFSDP 383

  Fly  1430 SLPEATEKNQNPEGASNQTVSADNL--AWKQTVETIAENVFA-----SAKTQIISN--------- 1478
            ::               |.:|...|  |:..:.|.:...:|:     :|.::|:|.         
pombe   384 TV---------------QMLSLQELSEAFAMSTEDMLVGLFSTDSYIAAFSEILSGRNYDFGEVS 433

  Fly  1479 -QLAMN----TSSSREA----RAKHKESGTNQ--------MHKDNISGPS-----PLSRE----- 1516
             ||.::    .|:..||    .||...|...:        |...:|:..:     .||::     
pombe   434 IQLMLSCTTCVSNMMEALPLCMAKIAYSPIVRILCERMFDMQYIDIAEQALGVLERLSKDFGICI 498

  Fly  1517 LEHISDLSAIN------------------NSMPAINSSNVSDLATISENLSLTELSKENICRVLT 1563
            |||...|:|:.                  |....::.||.|....|...||....|.:.|  |::
pombe   499 LEHRGMLAALQYFDFFYTTVQRTAISLAANCCKFLDESNASAAEEIIPLLSNILQSSDTI--VVS 561

  Fly  1564 PSYKPAESVTASQSSSHPDVQSSSPRENDIKNISN-----IEENNKMNAN-------NSVNKISK 1616
            .:|...|::..|..:| |::..:...|:.|..|.|     ..:|..|:..       :|:.:.|.
pombe   562 KAYSCLETIIESLKTS-PNIIETIISEDLITTIVNALTNSTSQNKSMHLQVQLLHIISSLCQSSS 625

  Fly  1617 DLLANLRTSN--------IAGCPPV-TQLSTEALEMIDKMRDGVDMIRNMSNSILSTDTFPVPCT 1672
            .|:......|        :.|.||. |....:.:.|.......:::|.|:..:|.|         
pombe   626 ALILPFLNHNLPDVMYEMLCGIPPSDTSHQADMITMQSLYYCPIELIENLLRAITS--------- 681

  Fly  1673 NVPVGGKKTPKAQALINPDNANQKQIIVTSEEFPTKSSKKPSVTLKPAQQPNAVLSIVDIKEQPI 1737
                           :.|.|.:.     .|:||.||..:..|:.|........::.:.||:...:
pombe   682 ---------------LLPKNTSN-----LSDEFNTKLYRLNSILLTVVMDIYFIVPLHDIRSLAV 726

  Fly  1738 SNENVSVPSQMSISVPNLTTTSASEVPSTSEVATHTGLLETFAAIARRRTSQGTNIQD------- 1795
            :   .::....||...||.....| :|.:|.:          |:|...|.|.....:|       
pombe   727 T---TALKMLCSIRENNLDGLVCS-LPLSSFI----------ASILNSRKSDNFLKRDALEMCLF 777

  Fly  1796 ---------NQIMNAEANVNEHGDQNASGSFLGHSVTS-LVKLALSSNF--------HSGL--LS 1840
                     :.:...|..|.|.|       ||..|..: :.|:.||.:|        |..|  ||
pombe   778 LLEALPNVYSSLFIREGVVQEVG-------FLVRSTNADMKKIKLSISFSQNKSAARHEELKNLS 835

  Fly  1841 TAQSYPS--LSSNNSENIAPS------------------------------NPSNTSAGQQSAST 1873
            |.:|...  ||:...||:..|                              ..||.::.:...|.
pombe   836 TLKSLAKEFLSNYKEENLENSTLVQLKQLSKHLLSETKQDESFSELAKIFQEGSNITSHELLHSG 900

  Fly  1874 INHTLTMSLTSTSSDSEQVSLEDFL---ESCRAPALLGDLDDEDDMDEDNDEEENEDEYEEVGNT 1935
            :.|.|.:||....|.    ||..||   .:|                       :|.|..|.||.
pombe   901 LIHNLLLSLKKFGSS----SLRTFLLAMNTC-----------------------DEREVLEFGNG 938

  Fly  1936 LLQVMV--SRNLLTFMDDEAM-------ENRLVGVTKRKSWDDEFVLK----------------- 1974
            .|..::  .:|||:.:::..:       ||.:..|..|     :|.|:                 
pombe   939 PLVSLIFCLQNLLSTVENFQLSTLPPDTENAVDHVFSR-----QFKLRLMALPGSRIRPPFRSLV 998

  Fly  1975 ---------------------------RQFSALIPAFDPRPGRTNVNQTSDLEIS-PLGAELP-- 2009
                                       |:||.|..|...|...:..::.|..:.: .:..:.|  
pombe   999 VSINGLATIRTLDNYLHSRISVRNETGRRFSILREAGSLRESMSGSSRNSSGDYTDSMSQDAPNH 1063

  Fly  2010 --KPQQSGGPETIEQ-------PLLGLKLRGPGIGGIPEVEIDLSNTDWTIFRAVQELLQCSQLN 2065
              :|.:.....|...       .|:|.|        :|.        :.||||.:.|.:|.|..:
pombe  1064 TTEPSERRDSSTSSHFEEHFVFSLMGKK--------VPR--------NKTIFRILYEYIQLSDDH 1112

  Fly  2066 KLDKFRKIWEPTYTIVYREVSPEAQESTCLESEEFPQTPDVSSKSGASTLSPNSPMHIGFNVADN 2130
            .||.|   |:....|.|.|                   ||.........|:..:... ||::   
pombe  1113 TLDDF---WKTPVPIFYGE-------------------PDCIHNDMKGELNYENETE-GFSI--- 1151

  Fly  2131 NLCSVDDVLELLTQ-INGLNQSEIDSDVKEHGVSVLSEDLFISKKITNKLQQQIQDPLVLASNAL 2194
            |:..:.|:|.:|.. |..::....|...:.:..::|::  |.:.|::.||.:|:::..::....|
pombe  1152 NIREILDLLSILYYGIRDVHTLFPDKHFRGNIENILTD--FSNWKLSAKLNRQLEEQQLVVHGCL 1214

  Fly  2195 PNWCENLNQSCPFLFPFETRQLYFNCTSFGASRSIVCLQSQRDVTVERQRIPIMSPRRDDHEFRI 2259
            |:||.:|..:.|||.|||||.|....|:||.|||:..|.|         |.|.:|........:.
pombe  1215 PSWCISLTSAYPFLVPFETRYLLLQSTAFGLSRSVSFLLS---------RNPELSKNESSSILQF 1270

  Fly  2260 GRLKHERVKVPRNEDLLMWAMQVMKTHCNRKSVLEVEFLDEEGTGLGPTLEFYALVAAEIQRSDL 2324
            ..|..:::::.|.: :..:|:.::.|:...:::||:|:.||.|:|||||||||..|:.|...:.|
pombe  1271 VSLHRQKIRISRKK-IFNYALHLLATYAASENILEIEYEDEVGSGLGPTLEFYTSVSKEFTLNSL 1334

  Fly  2325 CMWLCDDDLGEDTENSTQSAEGNSKPVGYYVNRREHGIFPAPLPQNSEICENVLKYFWFF--GVF 2387
            .:|..|              :.|||.| |..:    |:||:|:|......||..|...||  |.|
pombe  1335 DIWRND--------------QPNSKFV-YQAS----GLFPSPIPLLGSSPENERKISLFFALGQF 1380

  Fly  2388 VAKVLQDMRLVDIPLSTSFLQLLCHNKVLSRNLQKVISDRRNGDLSVVSEDSDIVETCTKLLRTD 2452
            ||:.:.|.|::.|..:..|         .:||:...||                     .:.:.|
pombe  1381 VARSIYDSRIISIQFNPLF---------FARNIPLTIS---------------------SVAKVD 1415

  Fly  2453 SNKSNAFGGILSLENLKEIDPTRYQFLQEMQNLLLRKQSIEFDDTISAEKKHELINELKLQTQNG 2517
            ...:|      ||..|:::.|.:                                |....:|   
pombe  1416 KGLAN------SLRYLEKLIPGK--------------------------------NPTNAET--- 1439

  Fly  2518 LEVSLEDLALTFTYLPSSSIYGYTQAELLPNGSSVNVTIDNLEAYCELLMNFILQDGIAQQMKAF 2582
             ::.||||.|.|| ||     |:...||:|:|:|..||..|:..|...::::.:..|:.||::||
pombe  1440 -DIKLEDLHLDFT-LP-----GFPSIELIPDGASTPVTTFNVSDYLNYVIDYTVGKGVQQQLEAF 1497

  Fly  2583 SDGFNEVFPLKKLAAFTPSEARMMICGEQFPHWSREDIISYTEPKLGYNKDSPGFQRFVNVLLSM 2647
            .:||:.|||...|...|..|. :.:.|.....||...::.......||..:||..||.:.::..|
pombe  1498 QNGFSSVFPYTSLQVLTEHEL-VTLFGTVDEDWSYATLMKSIVADHGYTMESPTIQRLLTLMSQM 1561

  Fly  2648 SGDERKAFLQFTTGCSSLPPGGLANLHPRLTVVRKVDAG---VGSY-PSVNTCVHYLKLPDYPTE 2708
            :..|::.||||.||...||.||.|.|:|.|||||:::..   ...| |||.|||:|||||:|.:.
pombe  1562 NFQEQRDFLQFITGSRKLPIGGFAGLNPPLTVVRRLNEPPYVPDDYLPSVMTCVNYLKLPEYSSS 1626

  Fly  2709 EIMKERLLTATKE--KGFHLN 2727
            |::..||..|..|  ..|||:
pombe  1627 EVLGSRLSKAILEGQGSFHLS 1647

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ufd4NP_609369.1 ANK repeat 393..420 CDD:293786
ANK 396..509 CDD:238125
ANK repeat 422..453 CDD:293786
ANK repeat 455..484 CDD:293786
F5_F8_type_C 1173..1298 CDD:329041 30/140 (21%)
MIB_HERC2 1333..1389 CDD:310955 12/63 (19%)
DamX 1576..>1725 CDD:330571 30/169 (18%)
HECTc 2265..2725 CDD:238033 137/467 (29%)
SPAC12B10.01cNP_594633.2 HECTc 1276..1645 CDD:238033 137/467 (29%)
HECTc 1301..1642 CDD:214523 134/438 (31%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 131 1.000 Domainoid score I1318
eggNOG 1 0.900 - - E1_COG5021
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR45670
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3704
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
44.030

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