| Sequence 1: | NP_609369.1 | Gene: | Ufd4 / 34378 | FlyBaseID: | FBgn0032208 | Length: | 2727 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_499392.1 | Gene: | oxi-1 / 176515 | WormBaseID: | WBGene00003898 | Length: | 1066 | Species: | Caenorhabditis elegans |
| Alignment Length: | 1303 | Identity: | 237/1303 - (18%) |
|---|---|---|---|
| Similarity: | 413/1303 - (31%) | Gaps: | 474/1303 - (36%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 1606 NANNSVNKISKDLLANLRTSNIAGCPPVTQLSTEALEMIDKMRDGVD--MIRNMSN--------- 1659
Fly 1660 --------SILSTDTF------------PVPCTNVPVGGKKTPKA---QALIN------------ 1689
Fly 1690 -PDNANQKQIIVTS---------------EEFPTK-----SSKKPSVTLKPAQQPNAVLSIVDIK 1733
Fly 1734 EQPISNENVSVPSQMSISVPNLTTTSASEVPSTSEVATHTGLLETFAAIAR-----RRTSQ--GT 1791
Fly 1792 NIQDNQIMNAEAN------VNE---------------------------HGDQNASGSF----LG 1819
Fly 1820 HSVTSLVKL---ALSS-NFHSGLLSTAQSYPSLSSNNSENIAPSNPSNTSAGQQSASTINHTLTM 1880
Fly 1881 SLTSTSSDSEQVSLEDFLESCRAPALLGDLDDEDDMDEDNDEEENEDEYEEVGNTLLQV-MVSRN 1944
Fly 1945 LLTFMDDEAMENRLVGVTKRKSWDDEFVLKRQFSALIPAFDPRPGRTN---VNQTSDLEISPLGA 2006
Fly 2007 ELPKPQQSGGPETIEQPLLGLKLRGPGIGGIPEVEIDLSNTDWTIFRAVQELLQCSQLNKLDKFR 2071
Fly 2072 KIW------------------EPTYTIVYREVSPE---AQEST-CLESEEFPQ--TPDVSSKSGA 2112
Fly 2113 STLSPNSPMHIGFNVADNNLCSVDDVLELLTQINGLNQSEIDSDVKEHGVSVLSEDLFISKKITN 2177
Fly 2178 KLQQQIQDPLVLASNALPNWCENLNQSCPFLFPFETRQLYFNCTSFGASRSIVCLQSQRDVTVER 2242
Fly 2243 QRIPIMSPRRDDHEFRIGRLKHERVKVPRNEDLLMWAMQVMKTHCNRKSVLEVEFLDEEG---TG 2304
Fly 2305 L---GPTLEFYALVAAEIQRSDLCMWLCDDDLGEDTENSTQSAEGNSKPVGYYVNRREHGI-FPA 2365
Fly 2366 PLPQNSEICENVLKYFWFFGVFVAKVLQDMRLVDIPLSTSFLQLLCHNKVLSRNLQKVISDRRNG 2430
Fly 2431 DLSVVSEDSDIVETCTKLLRTDSNKSNAFGGILSLENLKEIDPTRYQFLQEMQNLLLRKQSIEFD 2495
Fly 2496 DTISAEKKHELINELKLQTQNGLEVSLEDLALTFTYLPSSSIYGYTQAELLPNGSSVNVTIDNLE 2560
Fly 2561 AYCELLMNFILQDGIAQQMKAFSDGFNEVFPLKKLAAFTPSEARMMICGEQFPHWSREDI-ISYT 2624
Fly 2625 EPKLGYNKDSPGFQRFVNVLLSM-----SGDERKAFLQFTTGCSSLPPGGLANLHPRLTV----- 2679
Fly 2680 -------------------VRKVDAGVGSYPSVNTCVHYLKLPDYPTEEIMKERLLTATKE-KGF 2724
Fly 2725 HLN 2727 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| Ufd4 | NP_609369.1 | ANK repeat | 393..420 | CDD:293786 | |
| ANK | 396..509 | CDD:238125 | |||
| ANK repeat | 422..453 | CDD:293786 | |||
| ANK repeat | 455..484 | CDD:293786 | |||
| F5_F8_type_C | 1173..1298 | CDD:329041 | |||
| MIB_HERC2 | 1333..1389 | CDD:310955 | |||
| DamX | 1576..>1725 | CDD:330571 | 30/185 (16%) | ||
| HECTc | 2265..2725 | CDD:238033 | 95/497 (19%) | ||
| oxi-1 | NP_499392.1 | HECTc | 684..1064 | CDD:238033 | 101/525 (19%) |
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 1 | 0.900 | - | - | E1_COG5021 | |
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 0 | 0.000 | Not matched by this tool. | |||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 1 | 0.900 | |||||