DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ufd4 and Plekha5

DIOPT Version :9

Sequence 1:NP_609369.1 Gene:Ufd4 / 34378 FlyBaseID:FBgn0032208 Length:2727 Species:Drosophila melanogaster
Sequence 2:XP_006506926.1 Gene:Plekha5 / 109135 MGIID:1923802 Length:1270 Species:Mus musculus


Alignment Length:1395 Identity:251/1395 - (17%)
Similarity:451/1395 - (32%) Gaps:516/1395 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly  1416 GGNTLTSRKSSSTPSLPEATEKNQNPEGAS---NQTVSADNLAWKQTVETIAEN-VFASAKTQII 1476
            |...:|..:..|| .||...|:....|||.   |............|.:...:| :|      ::
Mouse    45 GEAVVTGHRRQST-DLPTGWEEAYTFEGARYYINHNERKVTCKHPVTGQPSQDNCIF------VV 102

  Fly  1477 SNQ-LAMNTSSSREAR--AKHKESGTNQMHKDNISGP-SPL---SRELEHISDLSAINNSM---- 1530
            ::| :|..||..::.|  :...|:....|..|....| ||:   ||..:.:.:....:||:    
Mouse   103 NDQTVATMTSEDKKERPISMINEASNYNMASDYAVHPMSPVGRTSRASKKVHNFGKRSNSIKRNP 167

  Fly  1531 --PAI--------NSSN----------VSDLATISENLSLTELSKEN--ICRVLTPSYKPAESVT 1573
              |.:        :|:.          :|||.     |......||.  :..:|.||::.| .:|
Mouse   168 NAPVVRRGWLYKQDSTGMKLWKKRWFVLSDLC-----LFYYRDEKEEGILGSILLPSFQIA-MLT 226

  Fly  1574 ASQ--------SSSHPDVQ-----SSSPRENDI-------KNISNIEENNKMNANNSVNKISKDL 1618
            |..        .::||:::     :.:.:|.::       ..:...|...::..|..|:||:.|.
Mouse   227 AEDHINRKYAFKAAHPNMRTYYFCTDTGKEMELWMKAMLDAALVQTEPVKRITFNFRVDKITTDS 291

  Fly  1619 LANLRTSNIAG-----CPPVT--QLSTEALEMIDK----------MRDGVDMIRNMSNSILSTDT 1666
            .:...|:||..     .|.|.  |.:.|..::.:|          .:||.|......||:     
Mouse   292 ASTKETNNIPNHRVLIRPEVQNHQKNKEISKIEEKRALEAERYGFQKDGQDRPLTKINSV----- 351

  Fly  1667 FPVPCTNVPVGGKKTPKAQALIN---------PDNANQKQIIVTSEEFPTKSSKKPSVTL---KP 1719
                            |..:|::         |.|.:.:.|.|.|.:     .|..:|:|   :.
Mouse   352 ----------------KLNSLLSEYESGPDCPPQNVHYRPINVNSSD-----GKAVNVSLADVRG 395

  Fly  1720 AQQPNAVLSIVDIKEQPISNENVSVPSQMSISVPNLTTTSASEVPSTSEVATHTGLLE------T 1778
            ...|||         .|::.|...|..:         |.|..::....:|....||.|      :
Mouse   396 GSHPNA---------GPLATEADRVIQR---------TNSMQQLEQWIKVQKGRGLEEEPRGVIS 442

  Fly  1779 FAAIARRRTSQGTNI-----------------QDNQIMNAEANVNEH---GDQNASGSFLGHSVT 1823
            :..:.|...|....|                 :...|.:..::.:|.   |.:....|....::.
Mouse   443 YQTLPRNMPSHRAQILARCPEGYRTLPRNSKTRPESICSVTSSGHEKTGPGAEEKRRSMRDDTMW 507

  Fly  1824 SLVKLALSSNFHS-------GLLSTAQSYPSLSSNNSENIAPSNPSNTSAGQQSASTINHTLTMS 1881
            .|.:......:|.       |.||:.::...:|.....:| |::||:.||......:...|....
Mouse   508 QLYEWQQRQFYHKQSTLPRHGCLSSPKAMVQVSDQTMHSI-PTSPSHGSAAAYQGFSPQRTYRSE 571

  Fly  1882 LTSTSSDSEQVSLEDFLESCRAPALLGDLDDEDDMDEDNDEEENEDEYEEVGNTLLQVMVSRNLL 1946
            :||                   |...||:    .:|..:.....:..|                 
Mouse   572 VTS-------------------PIQRGDV----TIDRRHRPHHPKHVY----------------- 596

  Fly  1947 TFMDDEAMENRLVGVTKRKSWDDEFVLKRQFSALIPAFDPRPGRTNVNQTSDLEISPLGAELPKP 2011
                          |..|:|              :||     |.|            |.|..|:.
Mouse   597 --------------VADRRS--------------MPA-----GLT------------LQAVSPQS 616

  Fly  2012 QQSGGPETIEQPLLGLKLRGPGIGGIPEVEIDLSNT-DWTIFRAVQELLQC-SQLNK-------- 2066
            .|...||  |..||.:|||        ..:.:||:. :.|:.:.:|..|:. |..|:        
Mouse   617 LQGRTPE--ELTLLLIKLR--------RQQAELSSVREHTLAQLMQLKLEAHSPKNEILSHHLQR 671

  Fly  2067 ----LDKFRKIWEPTYTIVYREVSPEAQESTCLESEEFPQTPDVSSKSGASTLSPNS-------- 2119
                ||...|..||..|:|:..:     |::.|..:.:.|.....:|.....||.:.        
Mouse   672 NTIYLDHQMKENEPIITMVHTMI-----ENSALRPQLYQQFLRQKNKISLYCLSQDECRGTLYKY 731

  Fly  2120 -PMHIGFNVADNNLCSVDDVLELLTQINGLNQSEIDSDVKEHGVSVLSEDLFISKKITNKLQQQI 2183
             |...|.:...:.||..|.|:..|.:  .|.|...:....|..:...|:::.::......:|..:
Mouse   732 RPEEAGIDAKLSRLCEQDKVVRALEE--KLQQLHKEKYTLEQALLSASQEIEMNADNPAAIQTVV 794

  Fly  2184 --QDPLVLASNALPNWCENLNQSCPFLFPFETRQLYFNCTSFGASRSIVCLQSQRDVTVERQRIP 2246
              :|.|   .|.|.:.|..|:::        |.:|......:.        :.:.||||.|.:  
Mouse   795 LQRDDL---QNGLLSTCRELSRA--------TAELERAWREYD--------KLEYDVTVTRDQ-- 838

  Fly  2247 IMSPRRDDHEFRIGRLKHERVKVPRNE-DLLMW----AMQVMKTHCNRKSVLE------------ 2294
             |..:.|    |:|.::.|...:.|.: ...:|    .|:.:..|..::...|            
Mouse   839 -MQGQLD----RLGEVQSESAGIQRAQIQKELWRIQDVMEGLSKHKQQRGSSETVGLAGSKPFSS 898

  Fly  2295 VEFLDEE---------------------------------------------------------- 2301
            |::..||                                                          
Mouse   899 VKYKSEEEEVVPPRPPLPRSYDFTEQPPIIPPLPSDSSSLLCYSRGPVHLPEDKKIHQVQGYPRN 963

  Fly  2302 GTGLGPTLEFY-----ALVAAEIQRSDLCMWLCDDDLGED-----TENSTQSAEGNSKPVGYYVN 2356
            |:..||....|     ....||:          |:..||:     :|......:|:..|||..:.
Mouse   964 GSHCGPDYRLYKSEPELTTVAEV----------DESNGEEKSEPVSETEAPVVKGSHFPVGVPLR 1018

  Fly  2357 RREHGIFPAPLPQNSEICENVLKYFWFFGVFVAKVLQDMRLVDIPLSTSFLQLLC---------- 2411
            .:      :|.|::|.|...|.       :...|.:.::| .:.|.|.  ::.||          
Mouse  1019 TK------SPTPESSTIASYVT-------LRKTKKMVELR-TERPRSA--VEQLCLAESARPRMT 1067

  Fly  2412 ---HNKVLSRNLQKVISDRRNGDLSVV--SEDSDIVET---CTKLLRTDSNKSNAFGGILSLENL 2468
               ..:.:.|:.|..:.:::.| |||:  |:.||:.::   .|:.||.|             :|:
Mouse  1068 VEEQLERIRRHQQACLREKKKG-LSVLGASDPSDVRDSPLRLTQTLRRD-------------DNV 1118

  Fly  2469 KEIDPTRYQFLQEMQNLLLRKQSIEFD-DTISAEKKHELINELKLQTQNGLEVSLEDLALTFTYL 2532
            ||:|...            |:..::.| :|.:|:..|                 |||..      
Mouse  1119 KELDTVH------------RENDVKPDYETPAAQCAH-----------------LEDAE------ 1148

  Fly  2533 PSSSIYG--YTQAELL----PNG-SSVNVT 2555
            |.::..|  ..::|:|    ||| :|..||
Mouse  1149 PQNADIGRKLKRSEMLYTPEPNGMASEEVT 1178

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ufd4NP_609369.1 ANK repeat 393..420 CDD:293786
ANK 396..509 CDD:238125
ANK repeat 422..453 CDD:293786
ANK repeat 455..484 CDD:293786
F5_F8_type_C 1173..1298 CDD:329041
MIB_HERC2 1333..1389 CDD:310955
DamX 1576..>1725 CDD:330571 33/197 (17%)
HECTc 2265..2725 CDD:238033 69/402 (17%)
Plekha5XP_006506926.1 WW 13..42 CDD:366073
WW 59..88 CDD:366073 7/28 (25%)
PH_PEPP1_2_3 165..268 CDD:270068 17/108 (16%)
Smc <623..>864 CDD:224117 58/283 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5021
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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