DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ufd4 and YAP1

DIOPT Version :9

Sequence 1:NP_609369.1 Gene:Ufd4 / 34378 FlyBaseID:FBgn0032208 Length:2727 Species:Drosophila melanogaster
Sequence 2:XP_005271435.1 Gene:YAP1 / 10413 HGNCID:16262 Length:510 Species:Homo sapiens


Alignment Length:550 Identity:101/550 - (18%)
Similarity:175/550 - (31%) Gaps:154/550 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly  1713 PSVTLKPAQQPNAVLSIVDIK---EQPISNENVSVPSQMSISVPNLTTTSASEVPST----SEVA 1770
            |:.|....|.|.|...||.::   |..:.....:|.:..:.:||........::|.:    .|..
Human    38 PAATQAAPQAPPAGHQIVHVRGDSETDLEALFNAVMNPKTANVPQTVPMRLRKLPDSFFKPPEPK 102

  Fly  1771 THTGLLETFAAIARRRTSQGTNIQDNQIMNAEANVNEHGDQNASGSFLGHSVTSLVKLALSSNFH 1835
            :|:....|.|..|...|.|......:. .:.:......|....:|...|.:.|            
Human   103 SHSRQASTDAGTAGALTPQHVRAHSSP-ASLQLGAVSPGTLTPTGVVSGPAAT------------ 154

  Fly  1836 SGLLSTAQSYPSLSSNNSENI---APSNPSNTSAGQQ-SASTINHTLT-----------MSLTST 1885
                .|||.....|....:::   |....:.||:||: ..:.|:.|.|           |::|:.
Human   155 ----PTAQHLRQSSFEIPDDVPLPAGWEMAKTSSGQRYFLNHIDQTTTWQDPRKAMLSQMNVTAP 215

  Fly  1886 SSDSEQVSLEDFLESCRAPALLGDLDD--EDDMDEDNDEEENEDEYEEVGNTLLQVMVSRNLLTF 1948
            :|...|   ::.:.|...|     |.|  |..|.:|.:                        :.:
Human   216 TSPPVQ---QNMMNSASGP-----LPDGWEQAMTQDGE------------------------IYY 248

  Fly  1949 MDDEAMENRLVGVTKRKSW-----DDEF--VLKRQFSALIPAFDPRP-----------GRTNVNQ 1995
            ::.:         .|..||     |..|  .:.::.|...|...|.|           |.:|.||
Human   249 INHK---------NKTTSWLDPRLDPRFGKAMNQRISQSAPVKQPPPLAPQSPQGGVMGGSNSNQ 304

  Fly  1996 TSDLEISPLGAE---------------LPKPQQSGGPETIEQP-LLGLKLRGPGIGGIPEVEIDL 2044
            ...:.:..|..|               .|:..::..|.|...| ...|.||..    :|.:|.|.
Human   305 QQQMRLQQLQMEKERLRLKQQELLRQVRPQAMRNINPSTANSPKCQELALRSQ----LPTLEQDG 365

  Fly  2045 SNTDWTIFRAVQELLQCSQLNKLDKFRKIWEPTYTIVYREVSPEAQESTCLESEEFPQTPDVSSK 2109
            ...:......:.:.|:....|..|.|..      :..|............:.|...|:|||    
Human   366 GTQNPVSSPGMSQELRTMTTNSSDPFLN------SGTYHSRDESTDSGLSMSSYSVPRTPD---- 420

  Fly  2110 SGASTLSPNSPMHIGFNVADNNLCS----VDDVLELLTQINGLNQSEIDSDVKEHGVSVLSEDLF 2170
               ..|:....|..|..:..:.|.|    ..|.||.:...| ::...::.|    |:::..|:|.
Human   421 ---DFLNSVDEMDTGDTINQSTLPSQQNRFPDYLEAIPGTN-VDLGTLEGD----GMNIEGEELM 477

  Fly  2171 ------ISKKITNKLQQQIQDPLVLASNAL 2194
                  :|..|.|.::.      |||:..|
Human   478 PSLQEALSSDILNDMES------VLAATKL 501

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ufd4NP_609369.1 ANK repeat 393..420 CDD:293786
ANK 396..509 CDD:238125
ANK repeat 422..453 CDD:293786
ANK repeat 455..484 CDD:293786
F5_F8_type_C 1173..1298 CDD:329041
MIB_HERC2 1333..1389 CDD:310955
DamX 1576..>1725 CDD:330571 4/11 (36%)
HECTc 2265..2725 CDD:238033
YAP1XP_005271435.1 WW 174..203 CDD:238122 8/28 (29%)
WW 232..261 CDD:366073 8/61 (13%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5021
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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