Sequence 1: | NP_609369.1 | Gene: | Ufd4 / 34378 | FlyBaseID: | FBgn0032208 | Length: | 2727 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_003197660.3 | Gene: | hecw2b / 100331355 | ZFINID: | ZDB-GENE-101001-3 | Length: | 1472 | Species: | Danio rerio |
Alignment Length: | 1769 | Identity: | 346/1769 - (19%) |
---|---|---|---|
Similarity: | 576/1769 - (32%) | Gaps: | 557/1769 - (31%) |
- Green bases have known domain annotations that are detailed below.
Fly 1161 SSEGKTLPYGKLEDILSRDSISLNCHTKDNKKAWFAIDLGVYIIPTAYTLRHARGYGRSALRNWL 1225
Fly 1226 LQGSKDGSTWTTLSTHVDDKSLVEPGSTATWPINCATDDSVWYRHIRIQQNGRNASGQTHYLSLS 1290
Fly 1291 GFEIYGRVVGVADDIGKSVKEAEAKTRRERRQIRAQLKHMTTGARVIRGVDWRWEEQDGCAEGTI 1355
Fly 1356 TGEIHNGWIDVKWDHGVRNSYR--------------MGAEGKYDLK--LADCEYLSAFDGNQSMG 1404
Fly 1405 SASTAAKPSEKG--GNTLTSRKSSSTP----SLPEATEKNQNPEGA--SNQTVSADNLAWKQTVE 1461
Fly 1462 TIAENVFASAKTQIISNQLAMNTSSSRE-------------ARAKHKESGTNQ---------MHK 1504
Fly 1505 DNISGPSPLSRELEHISDLSAINNSMPAINSSNVSDLATISENLSLTELSKENICRVLTPSYKPA 1569
Fly 1570 ESVTASQSSSH-----PDVQSSSPREN--------DIKNISNIEENNKMNANNSVNKI------- 1614
Fly 1615 SKDLLAN---LRTSNIAGCPPVTQLSTEALEMIDKMRDGVDMIRNMSNSILSTDTFPVPCTNVPV 1676
Fly 1677 GGKKTPKAQALINPDNANQKQIIVTSEEFPTK--SSKKPSVTLKPAQ-------QPNAVLS---- 1728
Fly 1729 -IVDIKEQP---ISNENVSVP-----SQMSISVPNLTTTSASEVPSTSEV--ATHTGLLETFAAI 1782
Fly 1783 ARRRTSQGTN--IQDNQIMNAEANVNEHGDQN-ASGSFLGHSV---TSLVKLALSSNFHSGLLST 1841
Fly 1842 A------QSYPSLSSNNS--ENIAPSNPSNTSAGQQS------ASTINHTLTMS----------L 1882
Fly 1883 TSTSSDSEQVSLEDFLESCRAPALLGDLDDEDDMDEDNDEEENED-------EYEEVG------- 1933
Fly 1934 ---NTLLQVMVSRNLLT-----------------FMDDEAMENRLVGVTKRKSWDDEFVLKRQFS 1978
Fly 1979 ALIPAFDPRPGRTNVNQTSDLEISPLGAELPKPQQSGGP---------ETIEQPLLGL------- 2027
Fly 2028 ---------KLRGPGIGGI--------PEVEIDLSNTDWTIFRAVQELLQCSQLNKLDKFRKIWE 2075
Fly 2076 PTYTIVYREVSPEAQESTCL-ESEEFPQTPDVSSKSGASTLSPNSPMHIGFNVADNNLCSVDDVL 2139
Fly 2140 ELLTQINGLNQSEIDSDVKEHGVSVLSEDLFISKKITNKLQQQIQDPLVLASNALPNWCENLNQS 2204
Fly 2205 CPFLFPFET--RQLY--FNCTSFGASRSIVCLQSQRDVTVERQRIPIMSPRRDDHEFRIGRLKHE 2265
Fly 2266 RVKVPRNEDLLMWAMQVMKTHCNRKSVLEVEFLDEEGTGL-GPTLEFYALVAAEIQRSDLCMWLC 2329
Fly 2330 DDDLGEDTENSTQSAEGNSKPVGYYVNRREHGIFPAPLPQNSEICENVLKYFWFFGVFVAKVLQD 2394
Fly 2395 MRLVDI----PLSTSFLQLLCHNKVLSRNLQKVISDRRNGDLSVVSEDSDIVETCTKLLRTDSNK 2455
Fly 2456 SNAFGGILSLENLKEIDPTRYQFLQEMQNLLLRKQSIEFDDTISAEKKHELINELKLQTQNGLEV 2520
Fly 2521 SLEDLALTFTYLPSSSIYG-YTQAELLPNGSSVNVTIDNLEAYCELLMNFILQDGIAQQMKAFSD 2584
Fly 2585 GFNEVFPLKKLAAFTPSEARMMICGE---QFPHWSREDIISYTEPKLGYNKDSPGFQRFVNVLLS 2646
Fly 2647 MSGDERKAFLQFTTGCSSLPPGGLANLH----PRLTVVRKVDAGVGSYPSVNTCVHYLKLPDYPT 2707
Fly 2708 EEIMKERLLTATKE 2721 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Ufd4 | NP_609369.1 | ANK repeat | 393..420 | CDD:293786 | |
ANK | 396..509 | CDD:238125 | |||
ANK repeat | 422..453 | CDD:293786 | |||
ANK repeat | 455..484 | CDD:293786 | |||
F5_F8_type_C | 1173..1298 | CDD:329041 | 23/124 (19%) | ||
MIB_HERC2 | 1333..1389 | CDD:310955 | 11/71 (15%) | ||
DamX | 1576..>1725 | CDD:330571 | 34/180 (19%) | ||
HECTc | 2265..2725 | CDD:238033 | 103/470 (22%) | ||
hecw2b | XP_003197660.3 | HECW_N | 58..177 | CDD:318711 | 33/211 (16%) |
C2_NEDL1-like | 198..334 | CDD:176073 | 24/150 (16%) | ||
LGT | <491..633 | CDD:320995 | 33/147 (22%) | ||
WW | 708..737 | CDD:306827 | 7/28 (25%) | ||
WW | 887..919 | CDD:197736 | 10/35 (29%) | ||
HECTc | 1117..1470 | CDD:238033 | 111/504 (22%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.000 |