DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ufd4 and hectd1

DIOPT Version :10

Sequence 1:NP_609369.1 Gene:Ufd4 / 34378 FlyBaseID:FBgn0032208 Length:2727 Species:Drosophila melanogaster
Sequence 2:XP_012823549.1 Gene:hectd1 / 100192372 XenbaseID:XB-GENE-1010869 Length:2580 Species:Xenopus tropicalis


Alignment Length:41 Identity:11/41 - (26%)
Similarity:19/41 - (46%) Gaps:6/41 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly  1220 VVVYIVCPFPDPSAVLRTIVESSIALGSVI------QSDRD 1254
            :::::.|....|..||......|.|||:.|      ::|.|
 Frog     8 LMLFVYCTGCGPQPVLHQPPAMSSALGTTIRLTCTLRNDHD 48

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ufd4NP_609369.1 ANKYR <375..>509 CDD:440430
ANK repeat 393..420 CDD:293786
ANK repeat 422..453 CDD:293786
ANK repeat 455..484 CDD:293786
Sad1_UNC 1173..1298 CDD:474037 11/41 (27%)
MIB_HERC2 1333..1390 CDD:461991
HECTc 2265..2725 CDD:238033
hectd1XP_012823549.1 ANKYR <366..>479 CDD:440430
ANK repeat 366..393 CDD:293786
PLN03192 <386..612 CDD:215625
ANK repeat 396..426 CDD:293786
ANK repeat 428..457 CDD:293786
Sad1_UNC 1130..1263 CDD:474037
MIB_HERC2 1300..1358 CDD:461991
BTHB_HectD1 1862..1927 CDD:439138
HECTc 2101..2578 CDD:238033
Blue background indicates that the domain is not in the aligned region.

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