Sequence 1: | NP_609369.1 | Gene: | Ufd4 / 34378 | FlyBaseID: | FBgn0032208 | Length: | 2727 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001136384.1 | Gene: | trip12 / 100158539 | XenbaseID: | XB-GENE-6071044 | Length: | 2056 | Species: | Xenopus tropicalis |
Alignment Length: | 2720 | Identity: | 582/2720 - (21%) |
---|---|---|---|
Similarity: | 929/2720 - (34%) | Gaps: | 910/2720 - (33%) |
- Green bases have known domain annotations that are detailed below.
Fly 244 GGNTHSSLTAAGTQPTSSSQPAATTNSDAINE-------------------NVAGTATISNSTK- 288
Fly 289 -VKSSDAAASPQS---ISTTISL--LSTLCRG---SPSITHDILRSQLADALERALQGDERCVLD 344
Fly 345 CMRFADLLLLLLFEGRQALNRGSNNPN------QG-QLAPRPRRNNTNTDRTH------------ 390
Fly 391 -----RQLIDCIRSKDSEALREAIESGGIDVNCMDDVGQTLLNWASAFGTLEMVEYLCEKGADVN 450
Fly 451 KGQRSSSLHYAACFGRPAIAKILLKFGAYPDLRDEDGKTPLDKARERLDDGHREVAAILQSPGEW 515
Fly 516 MSPDHSLLNKDGKKYTLME-----PRGDPEMAPIYLKVLLPIFCRTFLGSMLGSVRRASLALIKK 575
Fly 576 IVQ---YAYPTVLQSLSETSFSE---DAASTSGQNGGNLLIEVIASVLDNEDDGDGHLIVLNIIE 634
Fly 635 EIMCKTQEEFLDHFARLGVFAKVQA-----LMDTDAEELYVQLPGTVEEPAAAQRSSTSVVVA-P 693
Fly 694 RPTSDDPMEDAKEI--------LQGKPYHWREWSICRGRDCLY-----VWSDSVALELSNGSNGW 745
Fly 746 FRFIIDGKLATMYSSGSPENGNDSSENRG--EFLEKLMRARSCVIAGVVSQPILPTASALRLVVG 808
Fly 809 NWVLQSQKTNQL-QIHNTEGHQVTVLQDDLPGFIFESNRGTKHTFSAETVLGPDFASGWSTAKK- 871
Fly 872 -KRNKSKTEGQKFQVRNLSREIYNKYFK-SAQIIPRGAVAILTDIVKQIELSFEEQHMAPNGNWE 934
Fly 935 TTLTDALMKLSQ-LIHEDGVVSAYEMHSSGLVQALVAVLSVNHWETNSPRCKRNKMQKQRVSVFK 998
Fly 999 KCI----LEDNVESATNKPRTKSTASILIQKLVS--VLESTEKLPVYLYDSPCTGYSLQILQKRL 1057
Fly 1058 RFRLERAECESTLFDRSGRTLKMEPLATIGQLSKYLLKMVAKQWYDLDRSTYFYLKKIREHRTAT 1122
Fly 1123 VFTHSFDFDEEGLLFYIGSNAKTC----DWVNPAQYGLVQVTSSEGKTLPYGKLEDILSRDSISL 1183
Fly 1184 NCHTKDNKKAWFAIDLGVYIIPTAYTLRHARGYGRSALRNWLLQGSKDGSTWTTLSTHVDDKSLV 1248
Fly 1249 EPGSTATWPINCATDDSVWYRHIRIQQNGRNASGQT--HYLSLSGFEIYGRVVGVADDIGKSVKE 1311
Fly 1312 AEAKTRRERRQIRAQLKHMTTGARVIRGVDWR---WEEQDGCAEG---TITGEIHNGWI------ 1364
Fly 1365 ----------------------DVKWDHGVRNSYRMGAEGKYDLKLADCEYLSAFDGNQSMGSAS 1407
Fly 1408 TAAKPSEKGGNTLTSRKSSSTPSLPEATEKNQNPEGASNQTVSADNLAWKQTVETIAENVFASAK 1472
Fly 1473 TQIISNQLAMNTSSSREARAKHKESGTNQMHKDNISGPSPL---SRELEHISDLSAINNSMPAIN 1534
Fly 1535 SSNVSDLATISENLSLTELSKENICRVLTPSYKP----------AESVTASQS------SSHPDV 1583
Fly 1584 QSSSPRENDIKNISNIEENNKMNANNSVNKISKDLLANLRTSNIAGCPPVTQLSTEALEMIDKMR 1648
Fly 1649 DGVDMIRNMSNSILSTDTFPVPCTNVPVGGKKTPKAQALINPDNANQKQIIVTSEEFPTKSSKKP 1713
Fly 1714 SVTLKPAQQPNAVLSIVDIKEQPISNENVSVPSQMSISVPNLTTTSASEVPSTSEVATHTGLLET 1778
Fly 1779 FAAIARRRTSQGTNIQDNQIMNAEANVNE--HGDQNASGSFLGHSVTS---LVKLALSSNFH--- 1835
Fly 1836 -----SGLLSTAQSYPSLSSNNSENIAPSNPSNTSAGQQSASTIN-HTLTMSL------TSTSS- 1887
Fly 1888 -----DSEQVSLEDFLESCRAPALLGDL--DDEDDMDEDNDEEENED---EYEEVGNT--LLQVM 1940
Fly 1941 VSRNLLTFMDDEAMENRLVGVTKRKSWDDEFVLKRQFSALIPAFDPRPGRTNVNQTSDLEISPLG 2005
Fly 2006 AELPKPQQSGGPETIEQPLLGLKLRGPGIGGIPEVEIDLSNTDWTIFRAVQELLQCSQLNKLDKF 2070
Fly 2071 RKIWEPTYTIVYREVSPEAQESTCLESEEFPQTPDVSSKSGASTLSP------NSPMHIGFNVAD 2129
Fly 2130 NNLC-------------------SVD----DVLELLTQINGLNQ---SEIDSDV-KEHGVSVLSE 2167
Fly 2168 DLFISKKITNKLQQQIQDPLVLASNALPNWCENLNQSCPFLFPFETRQLYFNCTSFGASRSIVCL 2232
Fly 2233 QSQRDVTVERQRIPIMSP---RRDDHEFRIG-RLKHERVKVPRNEDLLMWAMQVMKTHCNRKSVL 2293
Fly 2294 EVEFLDEEGTGLGPTLEFYALVAAEIQRSDLCMWLCDDDLGEDT--ENSTQSAEGNSKPVGYYVN 2356
Fly 2357 RREHGIFPAPLPQNSE---ICENVLKYFWFFGVFVAKVLQDMRLVDIPLSTSFLQLLCHNKVLSR 2418
Fly 2419 NLQKVISDRRNGDLSVVSEDSDIVETCTKLLRTDSNKSNAFGGILSLENLKEIDPTRYQFLQEMQ 2483
Fly 2484 NLLLRKQSIEFDDTISAEKKHELINELKLQTQNGLEVSLEDLALTFTYLPSSSIYGYTQAELLPN 2548
Fly 2549 GSSVNVTIDNLEAYCELLMNFILQDGIAQQMKAFSDGFNEVFPLKKLAAFTPSEARMMICGEQFP 2613
Fly 2614 HWSREDIISYTEPKLGYNKDSPGFQRFVNVLLSMSGDERKAFLQFTTGCSSLPPGGLANLHPRLT 2678
Fly 2679 VVRKVDAGVGS----YPSVNTCVHYLKLPDYPTEEIMKERLLTATKE--KGFHLN 2727 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Ufd4 | NP_609369.1 | ANK repeat | 393..420 | CDD:293786 | 6/26 (23%) |
ANK | 396..509 | CDD:238125 | 26/112 (23%) | ||
ANK repeat | 422..453 | CDD:293786 | 6/30 (20%) | ||
ANK repeat | 455..484 | CDD:293786 | 6/28 (21%) | ||
F5_F8_type_C | 1173..1298 | CDD:329041 | 19/126 (15%) | ||
MIB_HERC2 | 1333..1389 | CDD:310955 | 15/89 (17%) | ||
DamX | 1576..>1725 | CDD:330571 | 27/154 (18%) | ||
HECTc | 2265..2725 | CDD:238033 | 158/470 (34%) | ||
trip12 | NP_001136384.1 | Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1..440 | 107/531 (20%) | |
PHA03307 | 84..>462 | CDD:223039 | 99/492 (20%) | ||
SRP1 | 483..>708 | CDD:227396 | 56/313 (18%) | ||
WWE | 805..866 | CDD:397111 | 16/86 (19%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1027..1147 | 35/151 (23%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1465..1500 | 9/34 (26%) | |||
K-box. /evidence=ECO:0000250 | 1560..1634 | 30/90 (33%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1632..1651 | 4/18 (22%) | |||
HECTc | 1654..2054 | CDD:238033 | 158/469 (34%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D10145at33208 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R3704 |
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.950 |