DRSC/TRiP Functional Genomics Resources

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Protein Alignment Utx and SWA2

DIOPT Version :9

Sequence 1:NP_609368.3 Gene:Utx / 34377 FlyBaseID:FBgn0260749 Length:1136 Species:Drosophila melanogaster
Sequence 2:NP_010606.1 Gene:SWA2 / 851918 SGDID:S000002728 Length:668 Species:Saccharomyces cerevisiae


Alignment Length:516 Identity:105/516 - (20%)
Similarity:187/516 - (36%) Gaps:138/516 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   379 NLGILYESCGQLRD---AYACYLNATKQISFQKSSL-IRKKQA-IRMKKDTIGLSKGLSQRI-TF 437
            :||:..|...:..:   .|..||...|....:::.| ||||:: |:|:|      .|||..: |.
Yeast   152 SLGLSIEEATEFYENDVTYERYLEILKSKQKERNDLAIRKKESGIKMEK------SGLSNIVGTD 210

  Fly   438 LEGQLSQAPLPSITSKRRQLCSIEEAWNLPISLEMNSRQQQTAQMLPRQVTKQSPVQGPPPPYPH 502
            .....|.|  ....:|.::|  :::..:.|  .|.|.|           :...|........|..
Yeast   211 SNNLFSMA--TDFFNKGKKL--VDQWTSFP--PEANDR-----------LNNYSKTHDKVEDYDL 258

  Fly   503 SQLSQSPIPSKRIKEDGTSQQEVTQN--NSQTSAQNLINISESLNQRNFNAMPESNKSSEQSVLD 565
            .|::.|  |::.:.||    .||.:|  .:....|:|:...|:.........|:.:.||..    
Yeast   259 PQVNDS--PNRILFED----NEVVENLPPADNPDQDLLTDFETKIDITKRTAPDVSHSSSP---- 313

  Fly   566 TFDDISNDIYKQNESIKLERLSQDAL-----------SNNEDSRHDFIGGDNADISTTFKIQMDS 619
                 ::.|..:..|.:.|.|.:|:|           .:||||.   :..:|::..:|..|.   
Yeast   314 -----TSGILIEENSRRNEPLIEDSLLDFSEGNLTNSKSNEDST---LFNENSNTDSTIPIS--- 367

  Fly   620 KQLMVAVKLLPIDEPPVHCTILQVNAPPPSPPDCPPQKLTRDQLLPPTPSVHLENKKHAFSPQLQ 684
                 .::|...:|.....|.|..|.               |.:          |....:...|.
Yeast   368 -----DIELSGYNEFKAKGTSLFKNG---------------DYI----------NSLQEYEKSLN 402

  Fly   685 EFCLKHPIAVVRGLAGVL--KLDLGLFS-----TKTLVEANPDHSVEVRTQVHQS-PDENWDTSQ 741
            ...|.||:.:: .|:.::  :|.:|.:|     :...:|..|....:.:.::..| |:.:::.  
Yeast   403 TLPLNHPLRII-ALSNIIASQLKIGEYSKSIENSSMALELFPSSKAKWKNKISNSDPERSFND-- 464

  Fly   742 GKRVWACISHRSHTTIAKYAQYQASSFQ--DSLK--------LILPQDESDKGFPGSQAMSDSDS 796
               :|..|..|           :|.||:  :|.|        ||......||...|.:...|..:
Yeast   465 ---IWPKIMIR-----------RAESFEHLESFKKALETYQELIKKNFFDDKIMQGKRRCQDFIN 515

  Fly   797 KDSVSNSNIVLKR--------KKHKINSKMLRFGTNVDLSDEKKWKPQLTELQKLPAFARV 849
            ...|..|..|.|:        ||..:.:.......:||.:.|.| |.:| |..||..:.:|
Yeast   516 PPPVKKSMPVKKKTTTTSPATKKQNLTASSSNSPISVDSTSEIK-KREL-ENAKLALYDKV 574

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
UtxNP_609368.3 TPR repeat 147..181 CDD:276809
TPR_11 156..216 CDD:290150
TPR repeat 186..216 CDD:276809
TPR repeat 228..255 CDD:276809
TPR_11 264..337 CDD:290150
TPR repeat 265..300 CDD:276809
TPR repeat 307..334 CDD:276809
TPR_11 339..402 CDD:290150 6/25 (24%)
TPR repeat 339..369 CDD:276809
TPR_1 340..373 CDD:278916
TPR repeat 374..402 CDD:276809 6/25 (24%)
JmjC 870..978 CDD:202224
SWA2NP_010606.1 Ubiq-assoc 138..181 CDD:401184 7/28 (25%)
TPR <374..497 CDD:223533 28/164 (17%)
TPR repeat 374..402 CDD:276809 6/52 (12%)
TPR repeat 407..441 CDD:276809 6/34 (18%)
TPR repeat 467..495 CDD:276809 8/38 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG1124
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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