DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Utx and Jarid2

DIOPT Version :9

Sequence 1:NP_609368.3 Gene:Utx / 34377 FlyBaseID:FBgn0260749 Length:1136 Species:Drosophila melanogaster
Sequence 2:XP_017456196.1 Gene:Jarid2 / 681740 RGDID:1591663 Length:1281 Species:Rattus norvegicus


Alignment Length:1113 Identity:207/1113 - (18%)
Similarity:351/1113 - (31%) Gaps:383/1113 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   278 VECLGEKKEREANALNFLQKSIEADPKSGQSLYLL--GRCYAGINK---------VHDAFLAYRN 331
            ||...::.|....|.|....|.::.|:.|:|...:  |..:.|.|:         .|....|...
  Rat   232 VEEEDDETEDVKTATNNASSSCQSTPRKGKSHKHVHNGHVFNGSNRSAREKEPAQKHRGREATPG 296

  Fly   332 SVEKSEGNAD---TWCSIGVLYQQQNQPT------DALQAYICAVQLDKDHKAA----------- 376
            ..:.||..||   ...|:.       |||      .:.:....:.|....|::|           
  Rat   297 KEKHSEHRADGRREQASVA-------QPTANPPAGSSTKGLAASHQPPPSHRSAQDSRKQVSKVN 354

  Fly   377 ----WTNLGILYESCGQLRDA----------YACYLNATKQISFQKSSLIRKKQAIRMK------ 421
                .::||....|..::|:.          .|.....|...:..|..|:::.:....|      
  Rat   355 GVTRMSSLGAGTNSAKKIREVRPSPSKTVKYTATVTKGTVTYTKAKRELVKETKPSHHKPSSAVN 419

  Fly   422 -----KDTIGLSKGLSQRITFLEGQLSQAPLPSITSKRRQL----CSIEEAW-NLPISLEMNSRQ 476
                 |.....:|...|.::......|.||..|......:|    |:.|... .|...|..:.|:
  Rat   420 HTISGKSESSNAKTRKQVLSLGGASTSTAPAASGLKASSRLNPKSCTKEVGGRQLREGLRNSKRR 484

  Fly   477 QQTAQMLPRQVTKQSPVQGPPPPYPHSQLSQSPIPSKRIKEDGTSQQEVTQNNSQTSAQNLIN-- 539
            .:.||    ||.||                ||| |.|.....|.::....:.::.:..::|:|  
  Rat   485 LEEAQ----QVDKQ----------------QSP-PKKMKGTAGIAEAPGRKASAASGEKSLLNGH 528

  Fly   540 ISESLNQRNFNAMPESNKSSEQSVLDTFDDISNDIYKQNESIKLERLSQDALSNNEDSR--HDFI 602
            :.:.:.:|:.........::.:::|      ....:.::|....|..|   .|..|.|.  ||..
  Rat   529 VKKEVPERSLERNRPKRAAAGKNML------GKQAHGKSEGTPCENRS---TSQPESSHKPHDPQ 584

  Fly   603 GGDNADISTTFKIQMDS-KQLMVAVKLLPIDEPPV---HCTILQVNAPPPS-----------PPD 652
            |          |.:..| |....|:..:|:..|..   |..::.:.:....           |||
  Rat   585 G----------KPEKGSGKSGWAAMDEIPVLRPSAKEFHDPLIYIESVRAQVEKYGMCRVIPPPD 639

  Fly   653 CPPQKLTRDQLLPPTPSVHLENKKHAFSPQLQEF-CLKHPIAVVRG-------LAGVLKLDLGLF 709
            ..|:....|::...|...|:......:.|.:|.. |:|..:. .:|       |.|..:|||..|
  Rat   640 WRPECKLNDEMRFVTQIQHIHKLGRRWGPNVQRLACIKKHLR-SQGITMDELPLIGGCELDLACF 703

  Fly   710 STKTLVEANPDHSVEVRTQVHQSPD-ENWD----------TSQGKRVWACISHRSHTTIAK---- 759
            .          ..:.....:.|..| :.|:          |:|.:             :||    
  Rat   704 F----------RLINEMGGMQQVTDLKKWNKLADMLRIPKTAQDR-------------LAKLQEA 745

  Fly   760 YAQYQASSFQDSLKLILPQDESDKGFPGSQAMSDSDSKDSVSNSNIVLKRK----------KHKI 814
            |.||..|  .|||.   |::....            .|:.:....|:.|||          .||.
  Rat   746 YCQYLLS--YDSLS---PEEHRRL------------EKEVLMEKEILEKRKGPLEGHTENDHHKF 793

  Fly   815 NSKMLRF----GTNVDLSDEKKWKPQLTELQKLP-------AFA--------------------- 847
            :| :.||    |....::....::.:|.|:.:.|       .||                     
  Rat   794 HS-LPRFEPKNGLIHGVTPRNGFRSKLKEVGRAPLKTGRRRLFAQEKEVVKEEEEDKGVLDDFYK 857

  Fly   848 -----RVIS-------AANMLS-----------------------------HVGHV--------- 862
                 |.:|       |.|:::                             |.|.|         
  Rat   858 CIYKGRSVSLTTFYRTARNIMNMCFSKEPAPAEIEQEYWRLVEEKDCHVAVHCGKVDTNTHGSGF 922

  Fly   863 ----------------ILGMNTVQLYM---KVPGSRTP------------GHQENNNFCSININI 896
                            :|..||..:..   .|||...|            ..::.|:...|:...
  Rat   923 PVGKSEPFSRHGWNLTVLPNNTGSILRHLGAVPGVTIPWLNIGMVFSTSCWSRDQNHLPYIDYLH 987

  Fly   897 GPGDCEWFAVP--------DAYWGGVHNLCEKN---NISYLHGSWWPVLEDLYKENIPVYRFIQK 950
            ...||.|:.:|        |.    ||.|.:.|   .:..|..:.....|.|.||.|.|:|.:|:
  Rat   988 TGADCIWYCIPAEEENKLEDV----VHTLLQGNGTPGLQMLESNVMISPEVLCKEGIKVHRTVQQ 1048

  Fly   951 PGDLV------WVNAGC--------VHWVQSIGWCNNIAW-NVGPLTARQ---------YSLAIE 991
            .|..|      :|:..|        ||:..:       .| ::|..||::         :|:...
  Rat  1049 SGQFVVCFPGSFVSKVCCGYNVSETVHFATT-------QWTSMGFETAKEMKRRHIAKPFSMEKL 1106

  Fly   992 RYEWNKVQAFKSIVPMVHLSWNLARNIKVSDTKLFELIKMCLLQTLKNVLHIQ-EYVKSKGVEIR 1055
            .|:..:.:|.|...|.  ||...|...::.||:|.:     ..|..:..||.. .|....|....
  Rat  1107 LYQIAQAEAKKENGPT--LSTISALLDELRDTELRQ-----RRQLFEAGLHSSARYGSHDGSSAV 1164

  Fly  1056 FNGRGK-------NEASHYCGQCEVEVFNVLFIKEQEKRHVVHCLSCALK---LSPSLQGIVCLE 1110
            .:|:.|       ..:...|..|:...:..:.::|.|  :||.||.|||:   ...|.:|:..: 
  Rat  1165 ADGKKKPRKWLQLETSERRCQICQHLCYLSMVVQENE--NVVFCLECALRHVEKQKSCRGLKLM- 1226

  Fly  1111 EYRLSELQ 1118
             ||..|.|
  Rat  1227 -YRYDEEQ 1233

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
UtxNP_609368.3 TPR repeat 147..181 CDD:276809
TPR_11 156..216 CDD:290150
TPR repeat 186..216 CDD:276809
TPR repeat 228..255 CDD:276809
TPR_11 264..337 CDD:290150 14/69 (20%)
TPR repeat 265..300 CDD:276809 6/21 (29%)
TPR repeat 307..334 CDD:276809 6/37 (16%)
TPR_11 339..402 CDD:290150 14/96 (15%)
TPR repeat 339..369 CDD:276809 6/38 (16%)
TPR_1 340..373 CDD:278916 7/41 (17%)
TPR repeat 374..402 CDD:276809 6/52 (12%)
JmjC 870..978 CDD:202224 31/148 (21%)
Jarid2XP_017456196.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0055
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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