DRSC/TRiP Functional Genomics Resources

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Protein Alignment Utx and Tmtc3

DIOPT Version :10

Sequence 1:NP_609368.3 Gene:Utx / 34377 FlyBaseID:FBgn0260749 Length:1136 Species:Drosophila melanogaster
Sequence 2:NP_001129330.1 Gene:Tmtc3 / 314785 RGDID:1306351 Length:920 Species:Rattus norvegicus


Alignment Length:543 Identity:118/543 - (21%)
Similarity:203/543 - (37%) Gaps:141/543 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   129 EYSEALSAYQKYLRFRENN--YWTNHAFIYGIGVAYFKLRCFKWAIKSFQELLYLSPNFTCANEV 191
            ||:..:||    |:..:||  .|.|      :|.|....:.|:.|:|.|.:..::.|:...|   
  Rat   436 EYTLFMSA----LKVNKNNAKLWNN------VGHALENEKNFEKALKYFLQATHVQPDDIGA--- 487

  Fly   192 HLRLGLMLKHCGEFHIALKHLQLALLYTYPSTFSELQVKFQIAHLYEVQNKHKAAKDGYEFLLNE 256
            |:.:|...|:......|.:...||     .|...::           :..|..||:    ...|.
  Rat   488 HMNVGRTYKNLNRTKEAEESYMLA-----KSLMPQI-----------IPGKKYAAR----IAPNH 532

  Fly   257 KNISLELKADVYRQLGWMYHCVECLGEKKEREANALNFLQKSIEADPKSGQSLYLLGRCYAGINK 321
            .|:.:.| |::.|           ..|.:..||:.|  .:::|...|...|:....|.....:||
  Rat   533 LNVYINL-ANLIR-----------ANESRLEEADQL--YRQAISMRPDFKQAYISRGELLLKMNK 583

  Fly   322 VHDAFLAYRNSVEKSEGNADTWCSIGVLYQQQNQPTDALQAYICAVQLDKDHKAAWTNLGILYES 386
            ...|..||..::|....|||.|.::.::|.:..:|.:||:.:..|::|:..||.|..|..||.:.
  Rat   584 PLKAKEAYLKALELDRNNADLWYNLAIVYIELKEPDEALKNFNRALELNSRHKLALFNSAILMQE 648

  Fly   387 CGQL------RDAYACYLNATKQIS---FQKSSLIRKKQAIRMKKDT---IGLSKGLSQRITFLE 439
            .|::      |.....|:|...|.:   |....|     |:..|||:   ..:.:.:..:..|..
  Rat   649 SGEVKLRPEARKRLLNYINEEPQDANGYFNLGML-----AMDDKKDSEAETWMKRAIKLQPDFRS 708

  Fly   440 GQLSQAPLPSITSKR-RQLCSIEEAWN----------LPISLEMNSRQ---------QQTAQMLP 484
            ...:.|.|.|.|:|. :.|..:||...          |...:.||.::         ::..:|.|
  Rat   709 ALFNLALLYSQTAKELKALPILEELLRYYPDHTKGLILKGDILMNQKKDIAGAKKCFEKILEMDP 773

  Fly   485 RQVTKQSPVQG----------------------------PPPPYPHSQLSQSPIPSKRIKEDGTS 521
                  |.|||                            |...|....||   |...:|...|..
  Rat   774 ------SNVQGKHNLCVVYFEEKDLLKAERCLVETLALAPHEEYIQRHLS---IVRDKIASSGIV 829

  Fly   522 QQEV--------TQNNSQTSAQNLIN-ISES----LNQRNFNAMPESNKSSEQSVLDTFDDISND 573
            .|.:        |:...:..::::.. ||||    :.:.|.|...:|||   ||..:...|..:.
  Rat   830 DQPLSPVDKTSGTEEKDEVPSEDVKEIISESRPAQIIKTNDNRKSQSNK---QSTGNADQDAPHK 891

  Fly   574 IYKQNESIKLERLSQDALSNNED 596
            ..|..:.|:.:|::  ||...|:
  Rat   892 TTKDIKEIEKKRVA--ALKRLEE 912

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
UtxNP_609368.3 TPR repeat 147..181 CDD:276809 9/35 (26%)
LapB 171..444 CDD:442196 62/284 (22%)
TPR repeat 186..216 CDD:276809 6/29 (21%)
TPR repeat 228..255 CDD:276809 3/26 (12%)
TPR repeat 265..300 CDD:276809 6/34 (18%)
TPR repeat 307..334 CDD:276809 7/26 (27%)
TPR repeat 339..369 CDD:276809 9/29 (31%)
TPR repeat 374..402 CDD:276809 9/33 (27%)
JmjC 870..978 CDD:396791
Tmtc3NP_001129330.1 Stt3 77..>375 CDD:440898
TMTC_DUF1736 263..336 CDD:462468
TPR 444..673 CDD:440225 63/271 (23%)
TPR repeat 451..479 CDD:276809 8/33 (24%)
TPR repeat 484..528 CDD:276809 11/66 (17%)
TPR repeat 535..562 CDD:276809 7/40 (18%)
LapB 549..804 CDD:442196 58/267 (22%)
TPR repeat 567..597 CDD:276809 7/29 (24%)
TPR repeat 602..630 CDD:276809 8/27 (30%)
TPR repeat 673..701 CDD:276809 6/32 (19%)
TPR repeat 706..736 CDD:276809 9/29 (31%)
TPR repeat 741..770 CDD:276809 3/28 (11%)
TPR repeat 776..799 CDD:276809 3/22 (14%)
ParB_N_Srx 799..>841 CDD:452888 8/44 (18%)
Blue background indicates that the domain is not in the aligned region.

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