DRSC/TRiP Functional Genomics Resources

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Protein Alignment Utx and Ifit3

DIOPT Version :9

Sequence 1:NP_609368.3 Gene:Utx / 34377 FlyBaseID:FBgn0260749 Length:1136 Species:Drosophila melanogaster
Sequence 2:NP_001007695.1 Gene:Ifit3 / 309526 RGDID:1359681 Length:411 Species:Rattus norvegicus


Alignment Length:422 Identity:84/422 - (19%)
Similarity:156/422 - (36%) Gaps:130/422 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   257 KNISLELKADVYRQLGWMYH-------CVECLGEKKEREANALNFLQKSIEADPKSGQSLYLLGR 314
            :|::.|.||.:|..|.::.|       .:||||:.::        |:||..:|....:.|...|.
  Rat    43 ENLNSEHKATMYDLLAYIKHLDGENEAALECLGQAED--------LRKSERSDRAEIKCLVTWGN 99

  Fly   315 ---CYAGINKVHDAFLAYRNSV---------------------------------------EKS- 336
               .|..|.::.:| .||.:.|                                       ||: 
  Rat   100 YAWIYYRIGQLSEA-QAYADKVRQVCQKFANPYSMECPELDCEEGWTRLKCGRNERAKMCFEKAL 163

  Fly   337 -EGNADTWCSIGV---LYQQQNQP-----TDALQAYICAVQLDKDHKAAWTNLGILYESCGQLRD 392
             |...|..|..|:   :|:.|.:|     .|||:.   |::|:..::.....|.:..:..|:..:
  Rat   164 EEKPEDPECRAGMAIAMYRLQEKPEKQFSVDALKQ---AMELNSQNQYEKVLLALKLQKMGEEAE 225

  Fly   393 AYACYLNATKQISFQKSSLIRKKQAIRMKKDTIGLSKGLSQRITFLEGQL----SQAPLPSIT-- 451
            |.....:|.::...|...|.:..|..|.|.:       |.:.|.||...|    :.:||.|:.  
  Rat   226 AERLVEDALEKGPNQTDVLQKAAQFYRKKGN-------LDRAIEFLGKALRSTANNSPLYSLVMC 283

  Fly   452 ---SKRRQLCSIEEAWNLPISLEMNSRQQQTAQMLPRQVTKQSPVQGPPPPYPHSQLSQSPIPSK 513
               .|.:||.:..||        ..|.::||.:.| |::|.:         |.:..|.:.|.|  
  Rat   284 RYREKLKQLQNTGEA--------DKSERRQTMEEL-RRLTME---------YMNKALQRRPSP-- 328

  Fly   514 RIKEDGTSQQEVTQNNSQTSAQNLINISESLNQRNFNAMPESNKSSEQSVLDTFDDISNDIYKQN 578
                             ..|..:||:..|...........||.::.:|.:.:.:.:: .:.::::
  Rat   329 -----------------LNSYSDLIDFPEVEKCYQMVFSEESPRAEDQELFERYCNL-QEYHRKS 375

  Fly   579 ESIK-LERLSQ----DALSNNEDSRHDFIGGD 605
            |.:| |:.|.|    :..:..|:.:.....||
  Rat   376 EGLKALKDLMQFPRPEKSTEKEEVKQQTQNGD 407

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
UtxNP_609368.3 TPR repeat 147..181 CDD:276809
TPR_11 156..216 CDD:290150
TPR repeat 186..216 CDD:276809
TPR repeat 228..255 CDD:276809
TPR_11 264..337 CDD:290150 23/123 (19%)
TPR repeat 265..300 CDD:276809 11/41 (27%)
TPR repeat 307..334 CDD:276809 8/68 (12%)
TPR_11 339..402 CDD:290150 15/70 (21%)
TPR repeat 339..369 CDD:276809 10/37 (27%)
TPR_1 340..373 CDD:278916 11/40 (28%)
TPR repeat 374..402 CDD:276809 4/27 (15%)
JmjC 870..978 CDD:202224
Ifit3NP_001007695.1 TPR_12 51..126 CDD:290160 20/83 (24%)
TPR repeat 51..79 CDD:276809 8/27 (30%)
TPR repeat 93..123 CDD:276809 8/30 (27%)
TPR_12 94..164 CDD:290160 10/70 (14%)
TPR repeat 136..164 CDD:276809 2/27 (7%)
TPR repeat 206..236 CDD:276809 4/29 (14%)
TPR_19 217..281 CDD:291240 16/70 (23%)
TPR repeat 241..269 CDD:276809 8/34 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG1124
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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