DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Utx and ssn6

DIOPT Version :9

Sequence 1:NP_609368.3 Gene:Utx / 34377 FlyBaseID:FBgn0260749 Length:1136 Species:Drosophila melanogaster
Sequence 2:NP_596609.1 Gene:ssn6 / 2540656 PomBaseID:SPBC23E6.09 Length:1102 Species:Schizosaccharomyces pombe


Alignment Length:847 Identity:202/847 - (23%)
Similarity:317/847 - (37%) Gaps:239/847 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 LRNLVQQTITNLQNYIANGQVHESKNSSDNKNAIQKFEPSTQAGEHMENTSSRNNDDTKPFEQDA 97
            :|:|:.   .|.:.:|..|::.|..:..|  .|:..:|           ::.|.|    |:...|
pombe   326 VRHLIS---LNEETWIQIGRLAELFDDQD--KALSAYE-----------SALRQN----PYSIPA 370

  Fly    98 KEKVSIIEEKHQD-----EHYVNAL-C---------KLGHLHLLLGEYSEALSAYQKYLRF---- 143
            ..:::.|....:.     |:|...| |         .|||.:|:..:.|.|.|||::.|..    
pombe   371 MLQIATILRNREQFPLAIEYYQTILDCDPKQGEIWSALGHCYLMQDDLSRAYSAYRQALYHLKDP 435

  Fly   144 RENNYWTNHAFIYGIGVAYFKLRCFKWAIKSFQELLYLSPNFTCANEVHLRLGLMLKHCGEFHIA 208
            ::...|      ||||:.|.:....:.|.::|.:.|.:.|||...||::.|||::.|...:|..:
pombe   436 KDPKLW------YGIGILYDRYGSHEHAEEAFMQCLRMDPNFEKVNEIYFRLGIIYKQQHKFAQS 494

  Fly   209 LKHLQLALLYTYPSTFSELQVKFQIAHLYEVQNKHKAAKDGYEFLLNEKNISLELKADVYRQLGW 273
            |: |...:|...|...:.|.:.|||.|:||.:.::|.||:.||.:|.|    ....|.|.:||||
pombe   495 LE-LFRHILDNPPKPLTVLDIYFQIGHVYEQRKEYKLAKEAYERVLAE----TPNHAKVLQQLGW 554

  Fly   274 MYHCVECLGEKKEREAN---ALNFLQKSIEADPKSGQSLYLLGRCYAGINKVHDAFLAYRNSVEK 335
            :.|      ::.....|   |:.:|.||:|||....||.||:||||....|.:.|:.||:.:|.:
pombe   555 LCH------QQSSSFTNQDLAIQYLTKSLEADDTDAQSWYLIGRCYVAQQKYNKAYEAYQQAVYR 613

  Fly   336 SEGNADTWCSIGVLYQQQNQPTDALQAYICAVQLDKDHKAAWTNLGILYESC-GQLRDAYACYLN 399
            ...|...||||||||.|.||..|||.||..|::|:......|.:||.||||| .|:.||...|..
pombe   614 DGRNPTFWCSIGVLYYQINQYQDALDAYSRAIRLNPYISEVWYDLGTLYESCHNQISDALDAYQR 678

  Fly   400 ATKQISFQKSSLIRKKQAIRMKKDTIGLSKGLSQRITFLEG------QLSQAPLPSITSKRRQLC 458
            |.                     :....:..:..|:..|.|      ::..|| ||         
pombe   679 AA---------------------ELDPTNPHIKARLQLLRGPNNEQHKIVNAP-PS--------- 712

  Fly   459 SIEEAWNLPISLEMNSRQQQTAQMLPRQVTKQSPV-------QGPPPPYPHSQLSQSPIPSKRIK 516
                  |:|        ..|||:.:.:.....|.|       ...||..|.:||..:...|..::
pombe   713 ------NVP--------NVQTAKYINQPGVPYSNVPVAQLSGNWQPPHLPQAQLPSATGQSGVVQ 763

  Fly   517 EDGTSQQEVTQNN-------------------SQTSAQNLINISESLNQRNFNAMPESN-----K 557
            :...:|..||.||                   |||:....|:.|.:...|..:|....|     |
pombe   764 QPYQTQPSVTNNNVATQPVIASTVPVQTAAPSSQTAVPQTIHQSNAFTPRGKHASGSRNSISSTK 828

  Fly   558 SSEQSVLD----TFDDISNDIYKQ--NESIKLERLSQDALSNNED----SRHDFIGGDNADISTT 612
            |.:..:.|    ..:.|||..:::  |......|.::.:.||..|    ::.|  .....:.||.
pombe   829 SPQHKLSDQPRSRNNSISNVSHRERSNSVSSKSRETRTSASNESDPKKSTQRD--SSKKLENSTV 891

  Fly   613 FKIQMDSKQLMVAVKLLPIDEPPVHCTILQVNAPPPSPPDCPPQKLTRDQLLPPTPSVHLENKKH 677
            ......|.....|.|.:...:|......::..|.|.|                 |...|.|.:|.
pombe   892 VSGSPSSSSKSDAAKSIKPQKPEPALKPVEGTADPKS-----------------TKRNHQETEKT 939

  Fly   678 AFSPQLQEFCLKHPIAVVRGLAGVLKLDLGLFSTKTL-----VEANPDHSVEVRTQVHQSPDENW 737
            |                          |..:.||:.:     .:.|.|...|   :|.||..|..
pombe   940 A--------------------------DTDVSSTEPVKRQKTADVNDDVGEE---EVKQSVSEQV 975

  Fly   738 DTSQGKRVWACISHRSHTTIAKYAQYQASSFQDSLKLILPQDESDKGFPGSQAMSDSDSKDSVSN 802
            |::|                                  |..:...:..|.|......|:.:.|:.
pombe   976 DSAQ----------------------------------LTSEPKSESLPKSPEEKSDDTSNDVTT 1006

  Fly   803 SN 804
            .|
pombe  1007 EN 1008

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
UtxNP_609368.3 TPR repeat 147..181 CDD:276809 9/33 (27%)
TPR_11 156..216 CDD:290150 20/59 (34%)
TPR repeat 186..216 CDD:276809 9/29 (31%)
TPR repeat 228..255 CDD:276809 11/26 (42%)
TPR_11 264..337 CDD:290150 28/75 (37%)
TPR repeat 265..300 CDD:276809 12/37 (32%)
TPR repeat 307..334 CDD:276809 12/26 (46%)
TPR_11 339..402 CDD:290150 32/63 (51%)
TPR repeat 339..369 CDD:276809 18/29 (62%)
TPR_1 340..373 CDD:278916 18/32 (56%)
TPR repeat 374..402 CDD:276809 13/28 (46%)
JmjC 870..978 CDD:202224
ssn6NP_596609.1 TPR repeat 335..362 CDD:276809 6/39 (15%)
TPR 346..679 CDD:223533 118/366 (32%)
TPR repeat 367..397 CDD:276809 5/29 (17%)
TPR_17 390..421 CDD:290167 8/30 (27%)
TPR repeat 403..430 CDD:276809 9/26 (35%)
TPR repeat 437..467 CDD:276809 9/35 (26%)
TPR_1 438..471 CDD:278916 10/38 (26%)
TPR repeat 472..503 CDD:276809 9/31 (29%)
TPR repeat 512..540 CDD:276809 12/27 (44%)
TPR 513..545 CDD:197478 13/35 (37%)
TPR_11 546..611 CDD:290150 27/70 (39%)
TPR repeat 546..578 CDD:276809 12/37 (32%)
TPR_1 584..617 CDD:278916 13/32 (41%)
TPR repeat 584..612 CDD:276809 12/27 (44%)
TPR repeat 617..647 CDD:276809 18/29 (62%)
TPR_1 621..649 CDD:278916 18/27 (67%)
TPR_1 652..686 CDD:278916 13/54 (24%)
TPR repeat 652..681 CDD:276809 13/49 (27%)
MIP-T3 841..>1097 CDD:287245 41/250 (16%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG1124
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001095
OrthoInspector 1 1.000 - - oto102163
orthoMCL 1 0.900 - - OOG6_101645
Panther 1 1.100 - - LDO PTHR14017
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R281
SonicParanoid 1 1.000 - - X932
TreeFam 00.000 Not matched by this tool.
76.930

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