DRSC/TRiP Functional Genomics Resources

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Protein Alignment Utx and jmjd-3.1

DIOPT Version :9

Sequence 1:NP_609368.3 Gene:Utx / 34377 FlyBaseID:FBgn0260749 Length:1136 Species:Drosophila melanogaster
Sequence 2:NP_509451.2 Gene:jmjd-3.1 / 181111 WormBaseID:WBGene00017571 Length:1061 Species:Caenorhabditis elegans


Alignment Length:966 Identity:208/966 - (21%)
Similarity:370/966 - (38%) Gaps:293/966 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   251 EFLLNEKNI--------------------SLELKADVYRQLGWMYHCVECLGEKKEREANALNFL 295
            :.::|:.|:                    |.:..:|:..|:|...|..:.:.||.|:   :|:..
 Worm   200 DVIMNDSNVVSKPKNLEKVETPDVLIGSGSNDKLSDMTEQIGNNQHLEKLISEKTEK---SLSDN 261

  Fly   296 QKSIEADPKSGQSLYLLGRCYAGINKVHDAFLAYRNSVEKSEG--NADTWCSIGVLYQQQNQPTD 358
            :.:::..|                       :.:.|||..|.|  :.|:                
 Worm   262 ETTLKPVP-----------------------VQHTNSVGSSIGTTSGDS---------------- 287

  Fly   359 ALQAYICAVQLDKDHKAAWT--NLGILYESCGQLRDAYACYLNATKQISFQKSSLIRKKQAIRMK 421
                     ::..|.:.:|:  |..:.|:.             |:....|.:::.:..:     .
 Worm   288 ---------EISDDDQKSWSPKNESLDYQP-------------ASTSSEFTETTSVANQ-----T 325

  Fly   422 KDTIGLSKGLSQRITFLEGQLSQAPLPSITSKRRQLCSIEEAWNLPISLEMNSRQQQTAQMLPRQ 486
            :...|.......|.:...|..|.||..|..:.|..         .||......:::|:|...|..
 Worm   326 ESNAGSVDDYCPRTSIDIGLDSSAPSCSSDATREP---------TPIKKRGRKKKEQSATEPPIP 381

  Fly   487 VTKQSPVQGPPPPYPHSQLSQSPIPSKRIK--------EDGTSQQEVTQ--------NNSQTSAQ 535
            .||::..:.|           :.|..:|:|        :||..::....        :.:.|.||
 Worm   382 RTKRAYTKNP-----------NTIRKRRMKKNQSDDEEDDGPPKRRTINYQIEFRDASGAWTMAQ 435

  Fly   536 NLINISESLNQRNFNAMPESNKSSEQSVLDTFDDISNDIYKQNESIKLERLSQDALSNNEDSRHD 600
            .||.:.:.::::|                             ::.:||.:..||.:..       
 Worm   436 QLIFVRDFMSKKN-----------------------------DKIVKLSKSRQDRVDK------- 464

  Fly   601 FIGGDNADISTTFKIQMDSKQLMVAVKL---LPIDEPPVHC-------TILQVNAP--------- 646
            ||        ..|:...||..:..|::|   .|......||       ||..|..|         
 Worm   465 FI--------LQFQKTQDSHYMRAAIQLNTIFPDQGNYRHCQDYLKDLTIRVVVPPKRREGKRKS 521

  Fly   647 --PPSPPD------------CPPQKLTR----------------DQLLPPT-------------- 667
              |.:||.            |..|::..                ::|.||.              
 Worm   522 EVPANPPALLLTGPLYLNFYCTSQEVLEAAGQLLEFHVNAVYKDERLQPPVADKTLLDLERAMYH 586

  Fly   668 ----------------PSVHLENKKHAFSPQLQEFCLKHPIAVVRGLAGVLKLDLGLFSTKTLVE 716
                            |::.:..|:..||...:.......|..:.|:|..|.:...|||...:.:
 Worm   587 EQVKDLTDYHKYRIPCPTLTVTTKEEVFSSDFERILNSASITNISGIAKALNIKTELFSLPEIAK 651

  Fly   717 ANPDHSVEVRTQVHQSPDENWDTSQGKRVWACISHRSHTTIAKYAQYQASSFQDSLKLILPQDES 781
            .:|:.|:::..||.||.|.|.| |:|.|.|...|:.|...:..:.:|.             |.|.
 Worm   652 CHPELSIDILNQVPQSADGNCD-SKGIRCWDVTSYSSKMKLQDFERYM-------------QKEE 702

  Fly   782 DKGFPGSQAMSDSDSKDSVSNSNIVLKRKKHKINSK-----------MLRFGTNVDLSDEKKWKP 835
            .:.....:.:|:..:|:..|...   |.|..:|.::           .::||||:||..| .:|.
 Worm   703 SEAMQAFETISNCTAKELESTCQ---KLKAERIAAQNAIEGCDETMPWIKFGTNIDLLSE-NFKK 763

  Fly   836 QLTELQKLPAFARVISAANMLSHVGHVILGMNTVQLYMKVPGSRTPGHQENNNFCSININIGPGD 900
            |:.|::|||.|.......|:|::.|..:||:||||:|.|..|||||.|.||:...|||.|.|||.
 Worm   764 QMNEIEKLPTFLLPNREGNLLNYAGVDVLGINTVQMYAKPIGSRTPAHMENSLMASINWNRGPGT 828

  Fly   901 CEWFAVPDAYWGGVHNLCEKNNISYLHGSWWPVLEDLYKENIPVYRFIQKPGDLVWVNAGCVHWV 965
            |.|||||..|||.:..:..::...|....:||..::|.:..:||.:|.||..::|:||.||.|||
 Worm   829 CVWFAVPYEYWGQLEFMIGEHGHKYQDQDYWPSEKELLELGVPVIKFEQKADEMVYVNTGCFHWV 893

  Fly   966 QSIGWCNNIAWNVGPLTARQYSLAIERYEWNKVQAFKSIVPMVHLSWNLAR-NIKVSDTKLFELI 1029
            ||..:|.|::||||.....|.:.:|..::.|.:...::.||:|:|.||.|| .:.|.|.::::.:
 Worm   894 QSNSFCINVSWNVGQPNFTQLATSIVAHDHNMLIGNQAHVPLVNLVWNAARQRLFVDDPEMYKAM 958

  Fly  1030 KMCLLQTLK------NVLHIQEYVKSKGVEIRFNGRGKNEASHYCGQCEVEVFNVL 1079
            :..::::|.      :::...:|:.....|.:...|.:.     |..|..|:||::
 Worm   959 RGVMIRSLAHSKWYFDLIDHHDYIVGDASEWKLADRVQR-----CKYCTSEIFNIV 1009

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
UtxNP_609368.3 TPR repeat 147..181 CDD:276809
TPR_11 156..216 CDD:290150
TPR repeat 186..216 CDD:276809
TPR repeat 228..255 CDD:276809 0/3 (0%)
TPR_11 264..337 CDD:290150 12/72 (17%)
TPR repeat 265..300 CDD:276809 8/34 (24%)
TPR repeat 307..334 CDD:276809 2/26 (8%)
TPR_11 339..402 CDD:290150 6/64 (9%)
TPR repeat 339..369 CDD:276809 1/29 (3%)
TPR_1 340..373 CDD:278916 1/32 (3%)
TPR repeat 374..402 CDD:276809 4/29 (14%)
JmjC 870..978 CDD:202224 49/107 (46%)
jmjd-3.1NP_509451.2 JmjC 764..828 CDD:214721 31/63 (49%)
JmjC 798..906 CDD:202224 49/107 (46%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D141383at33208
OrthoFinder 1 1.000 - - FOG0001095
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR14017
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
44.020

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