DRSC/TRiP Functional Genomics Resources

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Protein Alignment Utx and jarid2a

DIOPT Version :9

Sequence 1:NP_609368.3 Gene:Utx / 34377 FlyBaseID:FBgn0260749 Length:1136 Species:Drosophila melanogaster
Sequence 2:XP_001345885.4 Gene:jarid2a / 100007426 ZFINID:ZDB-GENE-061218-1 Length:1171 Species:Danio rerio


Alignment Length:958 Identity:171/958 - (17%)
Similarity:275/958 - (28%) Gaps:407/958 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly   473 NSRQQQTAQMLPRQVTKQSPVQG--------------PPP---PYPHSQLSQSPIPSKRIKEDGT 520
            |.|..:..|...:|.:|.:...|              ||.   .||...::.:  .::.:||...
Zfish   259 NLRPNRAVQEQKQQASKMNGTSGASAVSSRKTRELRTPPTKAVKYPKGHVTYT--KARLLKEAKL 321

  Fly   521 SQQEVTQNNSQTSAQNLINISESLNQRNFNAMPESNKSSEQSVLDTFDDISNDIYKQNESIK--- 582
            |....|..:||||.......|.:..|:...:...:.:.|.   .|||....|.:.:....::   
Zfish   322 SLSTHTHTHSQTSNSGKAQTSHAKMQKQVLSPATAGRLSG---TDTFPPRRNGLRQSKRQLELAG 383

  Fly   583 --------------LERLSQDALSNNEDSRHDFIGGDNADISTTFKIQMDSKQLMVAVKLLPIDE 633
                          ||..|:.|....: :|....|......::..|: |.:||:           
Zfish   384 AEVEVKRVKVHVVPLETRSRKAAQETQ-ARPQPAGSQRPKRASAGKL-MFTKQM----------- 435

  Fly   634 PPVHC--TILQVNAPPPSPPDCPPQKLTRDQLLP-------PTPSV-------HLENKKHAFS-- 680
               ||  ::|..|:|..|         |||.|.|       .||..       |..|....||  
Zfish   436 ---HCKASVLAKNSPTTS---------TRDILRPANSPKLSETPRTSNALKQGHPSNMTEPFSSE 488

  Fly   681 ------------------PQLQEFCLKHPIA---VVRGLAGVLKLDLGLFSTKTLVEANPDHSV- 723
                              |...||  ..|:.   :.||.|..    .|||.........|:..: 
Zfish   489 PKERGRRSAEITELPVFYPNTHEF--HDPLTFMELARGQAEA----FGLFRVVPPAGWRPECKLK 547

  Fly   724 -EVR-----TQVHQSPDENWDTSQGKRVW-------ACISHRSHTT------------------- 756
             |:|     ..||:         .|:| |       |||.....|.                   
Zfish   548 EEMRFVSYVQHVHK---------LGRR-WGPNVQRLACIRRHLRTQGINMEEPPLIGGCELDLAR 602

  Fly   757 ----------------------------IAKYAQYQASSFQDS-LKLILPQDESDKGFPGSQAMS 792
                                        |.:.||.:.:..|:: .:.:|..|...   |..:|..
Zfish   603 FFQIINEMGGMQQVTDLKTWGRLADLLGIPRSAQDRLAKLQEAYCQYLLSYDSLT---PAQRAQL 664

  Fly   793 DSD---SKDSVSNSN--------------IVLKR---KKHKINSKMLRFGTNVDLSD-------- 829
            :.:   .|:::...|              :.|.|   |...:|..:.|.|....|.:        
Zfish   665 EKEVLAEKEALERRNGPLEGQGDIAQHAALQLPRCEPKNGLVNGALHRSGAREHLRELDPTAKST 729

  Fly   830 -----EKKWKPQ--LTELQK---------LPAFARVI-SAANML--------------------- 856
                 ||:.:.:  ::|..|         |..|.|.. :..||.                     
Zfish   730 RQKRLEKRGEEEGMISEQHKCIYRGKSFSLTTFFRAARNTMNMCFSKEPDTAEVEKEYWRLVDEK 794

  Fly   857 -SHVGHVILGMNTVQLYMKVPGSRTP-GHQE------------NNNFCSININIG--PG------ 899
             |||     .::..::..|..||..| |..|            :||..||..::|  ||      
Zfish   795 ESHV-----AVHCGRVDTKTHGSGFPVGKSEPFSKHGWNLNVLSNNSGSILRHLGAVPGVTIPWL 854

  Fly   900 ----------------------------DCEWFAVP-------DAYWGGVHNLCEKN---NISYL 926
                                        ||.|:.:|       |..   ||.|.:.|   .:..|
Zfish   855 NIGMVFSTSCWCRDQNSLPYIDYLHTGADCIWYCIPAEEKSKLDKV---VHTLLQANGTPGLEML 916

  Fly   927 HGSWWPVLEDLYKENIPVYRFIQKPGDLVWVNAG-------CVHWVQSIGWCNNIAWNVGPLTAR 984
            ..:.....|.|.::.:.|||.:|..|..:....|       |.:.|.......|:.|        
Zfish   917 ERNIMISPEVLRRKGVKVYRTVQHSGQFMVCFPGTFVAKVCCGYSVSETMHFANLQW-------- 973

  Fly   985 QYSLAIERYEWNKVQAFKSIVPMVHLSWNLARNIK-------VSDTKLFELIKMC---------- 1032
                                   :.|.:..|:::|       .|..||...|..|          
Zfish   974 -----------------------MKLGYEAAKDLKRRRIEEPFSTEKLLYQITTCERDNKQLMTA 1015

  Fly  1033 ---LLQTLKNVLHIQEYVKSKGVEIRFNGR-GKN------------------EASHYCGQCEVEV 1075
               |.:.|::. .|::..:.....:|.:.| |.|                  .|...|..|:...
Zfish  1016 VSSLFRDLRDA-EIRQRRELFEAGLRLSARYGTNCESPTERRKQQRSRFTEDTADRRCQVCQHLC 1079

  Fly  1076 FNVLFIKEQEKRHVVHCLSCALKL-----SPSLQGIVCLEEYRLSELQ 1118
            :..:.:.|.:  :||.||.|||:.     ||  :|:..:  :|.||.|
Zfish  1080 YLSMVVHESD--NVVFCLECALRYIQKRRSP--RGLKMM--FRYSEEQ 1121

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
UtxNP_609368.3 TPR repeat 147..181 CDD:276809
TPR_11 156..216 CDD:290150
TPR repeat 186..216 CDD:276809
TPR repeat 228..255 CDD:276809
TPR_11 264..337 CDD:290150
TPR repeat 265..300 CDD:276809
TPR repeat 307..334 CDD:276809
TPR_11 339..402 CDD:290150
TPR repeat 339..369 CDD:276809
TPR_1 340..373 CDD:278916
TPR repeat 374..402 CDD:276809
JmjC 870..978 CDD:202224 35/173 (20%)
jarid2aXP_001345885.4 JmjN 501..542 CDD:301729 10/46 (22%)
ARID 568..654 CDD:198082 9/85 (11%)
JmjC 853..968 CDD:202224 20/117 (17%)
zf-C5HC2 1072..1125 CDD:280996 17/56 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0055
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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