DRSC/TRiP Functional Genomics Resources

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Protein Alignment trk and nog4

DIOPT Version :10

Sequence 1:NP_476767.2 Gene:trk / 34376 FlyBaseID:FBgn0003751 Length:235 Species:Drosophila melanogaster
Sequence 2:NP_001037873.1 Gene:nog4 / 733455 XenbaseID:XB-GENE-478615 Length:246 Species:Xenopus tropicalis


Alignment Length:230 Identity:49/230 - (21%)
Similarity:82/230 - (35%) Gaps:66/230 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 LGTAQDDADYCAE---LSTQSLAKILGQAFNPRYMSIDPPGEPEEK-----SYHLGYKRSSYELP 82
            |..:.:|..|..:   |....|.::||.:|:|.:||::.|.:.:..     |..|....|.|...
 Frog    56 LSLSPNDYHYSPKPKHLRVSRLLRLLGSSFDPFWMSVEQPADNDTSLLSTLSQDLYDGASRYRKK 120

  Fly    83 FYADSDAISVSHFPAWETNHFALVEKKKEAPRSKSLRTRSAFMDRVGHPRIDGFKQRPW-----E 142
            ...::.|:.           |..::..:|...:.||..::..              |.|     .
 Frog   121 LAQEAQALD-----------FGSLQLPRELSANSSLHVQNEI--------------RQWLVQRAS 160

  Fly   143 CSSKINWIDLGLNYFPRYIRSIECIARK--C-WYDHFNCKPKSFT-IKVL-----RRKTGSCIRI 198
            |.....|:|||..::||::|..:|....  | |.....|:....| ||:|     .:.||     
 Frog   161 CQLTSTWVDLGTVFWPRWVRHTDCDGANTACSWPPGMACRQAQLTQIKLLAWHCWMKDTG----- 220

  Fly   199 NDKLILITAEKFENDYTQLWIWEEI--AVNFCCEC 231
                 |..|       ||...|.::  .|...|:|
 Frog   221 -----LGWA-------TQQCTWRQVPYPVVAACKC 243

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
trkNP_476767.2 None
nog4NP_001037873.1 Noggin 65..245 CDD:399070 47/221 (21%)

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