DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4957 and LOC100534805

DIOPT Version :9

Sequence 1:NP_609366.2 Gene:CG4957 / 34374 FlyBaseID:FBgn0032205 Length:246 Species:Drosophila melanogaster
Sequence 2:NP_001303900.1 Gene:LOC100534805 / 100534805 -ID:- Length:308 Species:Danio rerio


Alignment Length:253 Identity:70/253 - (27%)
Similarity:118/253 - (46%) Gaps:27/253 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 AGHSKWANIKHTKALKDGARAALFAKISRQIRMAIQEGNSADPAINSLLRTEIERALKQNMPSGT 66
            |||:||:.:|..|..||.|||.:.||.:..||:|::|| ..:|.:|..|...:|:...:|:|..|
Zfish    70 AGHNKWSKVKDIKIPKDAARARVIAKYTMMIRIAVREG-GPNPELNVGLAQILEQCRNKNLPKTT 133

  Fly    67 IQNTLNKFKASK-VQLKKYRLDIKYKRNVYLICIFYTDNFSGVKMDATPMIKKAGGEFMDVGSL- 129
            |:..|...|:.. ||   |..:........::....|||......:...::.|.||...: |:. 
Zfish   134 IEGALKGAKSKPGVQ---YLYEATGPGGCKILIEVLTDNNMRSLNEVKRIMTKNGGALRE-GARR 194

  Fly   130 -FEDFGLIETRYDTAKLQNESSLEDKATNDAIELGAEEI-EVVDNVDGSV-NFLCSPVVLTSLSR 191
             |:..|::....|...       .:||...|||.|||:: |:.|..|..: .|:|....:.::..
Zfish   195 NFDRKGVVAASRDGIS-------SEKALELAIEAGAEDVQEMEDEEDRPILQFICDMTSMKAVRS 252

  Fly   192 NLEKAG-YTVENS----EHIFSPMNVVQLSPEEQKTYDVFVEKLRNLPGLEDIYDNVE 244
            .||..| :|:.:|    .|..|.:...||     :|....:|.|.:.|.:..::||::
Zfish   253 ALESLGVHTLSSSLEFVSHTPSLLTQTQL-----ETASTLLEALHDCPDVVRVWDNIQ 305

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4957NP_609366.2 Transcrip_reg 6..243 CDD:279972 66/246 (27%)
LOC100534805NP_001303900.1 Transcrip_reg 74..304 CDD:279972 66/246 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170596329
Domainoid 1 1.000 70 1.000 Domainoid score I9505
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H39079
Inparanoid 1 1.050 78 1.000 Inparanoid score I5236
OMA 1 1.010 - - QHG62540
OrthoDB 1 1.010 - - D1199273at2759
OrthoFinder 1 1.000 - - FOG0002606
OrthoInspector 1 1.000 - - otm25667
orthoMCL 1 0.900 - - OOG6_101960
Panther 1 1.100 - - LDO PTHR12532
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1857
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1211.940

Return to query results.
Submit another query.