DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4953 and TRAPPC13

DIOPT Version :9

Sequence 1:NP_609365.3 Gene:CG4953 / 34373 FlyBaseID:FBgn0032204 Length:438 Species:Drosophila melanogaster
Sequence 2:NP_001087224.1 Gene:TRAPPC13 / 80006 HGNCID:25828 Length:418 Species:Homo sapiens


Alignment Length:417 Identity:192/417 - (46%)
Similarity:257/417 - (61%) Gaps:17/417 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MEMVEP-DAHLVALKVMRLMRPTLVGLGPVVTCEPTDLV-QRFSSSQESDGMSGACAETLAAGQV 63
            ||:..| ..||:|||||||.:|||....| ||||..||. ..|:.....|..:...||.|..|::
Human     1 MEVNPPKQEHLLALKVMRLTKPTLFTNIP-VTCEEKDLPGDLFNQLMRDDPSTVNGAEVLMLGEM 64

  Fly    64 LLLPQSFGSIYLGETFASYICVHNTTPNPVECVTVKADLQSNTSRINLSMHENAKSPVVLPPGGT 128
            |.|||:||:|:|||||:|||.|||.:...|:.:.||||||:::.|:|||....|.:.  |.|...
Human    65 LTLPQNFGNIFLGETFSSYISVHNDSNQVVKDILVKADLQTSSQRLNLSASNAAVAE--LKPDCC 127

  Fly   129 IDDVIRYEVKEIGTHILVCEVNYSTPAGYAQSLRKFFKFQVLKPLDVKTKFYNAE------IDEI 187
            |||||.:||||||||||||.|:|:|.||.....||||||||||||||||||||||      .||:
Human   128 IDDVIHHEVKEIGTHILVCAVSYTTQAGEKMYFRKFFKFQVLKPLDVKTKFYNAESDLSSVTDEV 192

  Fly   188 YLEAQIQNVTTSPFCLEKVELDGSEDYSVTPLNTLPN-GE--SVFTVKHMLQPNNSCQFLYCIKP 249
            :|||||||:||||..:|||.|:.|..|:||.||::.. ||  |.|..:..|||.::.|:|||:||
Human   193 FLEAQIQNMTTSPMFMEKVSLEPSIMYNVTELNSVSQAGECVSTFGSRAYLQPMDTRQYLYCLKP 257

  Fly   250 KGDIAKNVDTLRQFNNVGKLDIVWRSNLGEKGRLQTSQLQRLPFECKTLRLEVLDAKNTIKIGTI 314
            |.:.|:....::....:|||||||::||||:||||||||||:......:||.:....:|:.:...
Human   258 KNEFAEKAGIIKGVTVIGKLDIVWKTNLGERGRLQTSQLQRMAPGYGDVRLSLEAIPDTVNLEEP 322

  Fly   315 FTFNCRVTN-TSEHPMKLNVRLAAKFSPDSQYTGCADFMLNLLQSGESAEFPLSVCPSKLGLVKI 378
            |...|::|| :||..|.|.:.:....|  ..:.|.:...|..|....|....|::..|..||..|
Human   323 FHITCKITNCSSERTMDLVLEMCNTNS--IHWCGISGRQLGKLHPSSSLCLALTLLSSVQGLQSI 385

  Fly   379 TPLVLTNTLQNEQFTIENVVDVFVVNS 405
            :.|.||:|.....:..:::..|.||:|
Human   386 SGLRLTDTFLKRTYEYDDIAQVCVVSS 412

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4953NP_609365.3 DUF974 64..289 CDD:283752 132/233 (57%)
TRAPPC13NP_001087224.1 DUF974 65..298 CDD:368770 133/234 (57%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165155662
Domainoid 1 1.000 249 1.000 Domainoid score I2139
eggNOG 1 0.900 - - E1_KOG2625
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H11792
Inparanoid 1 1.050 312 1.000 Inparanoid score I2591
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG55751
OrthoDB 1 1.010 - - D1608721at2759
OrthoFinder 1 1.000 - - FOG0006259
OrthoInspector 1 1.000 - - oto88880
orthoMCL 1 0.900 - - OOG6_103469
Panther 1 1.100 - - LDO PTHR13134
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2871
SonicParanoid 1 1.000 - - X4540
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1615.800

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