DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4953 and trappc13

DIOPT Version :9

Sequence 1:NP_609365.3 Gene:CG4953 / 34373 FlyBaseID:FBgn0032204 Length:438 Species:Drosophila melanogaster
Sequence 2:XP_012817757.1 Gene:trappc13 / 549181 XenbaseID:XB-GENE-5802753 Length:418 Species:Xenopus tropicalis


Alignment Length:419 Identity:193/419 - (46%)
Similarity:264/419 - (63%) Gaps:21/419 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MEMVEP-DAHLVALKVMRLMRPTLVGLGPVVTCEPTDLV-QRFSSSQESDGMSGACAETLAAGQV 63
            |::.:| ..||:|||||||.:|||....| ||||..||. ..||:..:.|..:...||||..|::
 Frog     1 MDVNQPKQEHLLALKVMRLTKPTLFTNIP-VTCEERDLPGDLFSTLMKDDPSTVKGAETLMLGEM 64

  Fly    64 LLLPQSFGSIYLGETFASYICVHNTTPNPVECVTVKADLQSNTSRINLSMHENAKSPVV--LPPG 126
            |.|||:||:|:|||||:|||.|||.:...|:.:.||||||:::.|:|||    |.:.||  |.|.
 Frog    65 LTLPQNFGNIFLGETFSSYISVHNDSNQVVKDIQVKADLQTSSQRLNLS----ASTAVVSELKPD 125

  Fly   127 GTIDDVIRYEVKEIGTHILVCEVNYSTPAGYAQSLRKFFKFQVLKPLDVKTKFYNAE------ID 185
            ..|||||.:||||||||||||.|:|:|..|.....||||||||||||||||||||||      .|
 Frog   126 SCIDDVIHHEVKEIGTHILVCAVSYTTQTGEKMYFRKFFKFQVLKPLDVKTKFYNAESDLSSVTD 190

  Fly   186 EIYLEAQIQNVTTSPFCLEKVELDGSEDYSVTPLNT-LPNGE--SVFTVKHMLQPNNSCQFLYCI 247
            |::|||||||:||||..:|||.|:.|..|:|:.||| :.||:  |.|..|..|||.::.|:|||:
 Frog   191 EVFLEAQIQNITTSPMFMEKVSLEPSIMYNVSELNTVITNGDGCSTFGTKTYLQPLDTRQYLYCL 255

  Fly   248 KPKGDIAKNVDTLRQFNNVGKLDIVWRSNLGEKGRLQTSQLQRLPFECKTLRLEVLDAKNTIKIG 312
            |||.:.|:....::....:|||||||::||||:||||||||||:......:||.:....:|:::.
 Frog   256 KPKPEFAEKAGVIKGVTVIGKLDIVWKTNLGERGRLQTSQLQRMAPGYGDVRLSIETIPDTVRLE 320

  Fly   313 TIFTFNCRVTN-TSEHPMKLNVRLAAKFSPDSQYTGCADFMLNLLQSGESAEFPLSVCPSKLGLV 376
            ..|...|::|| :||..|.|.:.:..  :....:.|.:...|..|....|....|::..|..||.
 Frog   321 EPFDITCKITNCSSERTMDLVLEMCN--TNAIHWCGVSGRQLGKLHPSSSLHLTLALLSSVQGLQ 383

  Fly   377 KITPLVLTNTLQNEQFTIENVVDVFVVNS 405
            .::.|.||:|.....:..:::..|.||:|
 Frog   384 SVSGLRLTDTFLKRTYEYDDIAQVCVVSS 412

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4953NP_609365.3 DUF974 64..289 CDD:283752 134/235 (57%)
trappc13XP_012817757.1 DUF974 65..297 CDD:283752 134/235 (57%)
Transglut_C 308..>380 CDD:279295 16/73 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 258 1.000 Domainoid score I1961
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H11792
Inparanoid 1 1.050 324 1.000 Inparanoid score I2459
OMA 1 1.010 - - QHG55751
OrthoDB 1 1.010 - - D1608721at2759
OrthoFinder 1 1.000 - - FOG0006259
OrthoInspector 1 1.000 - - oto102749
Panther 1 1.100 - - LDO PTHR13134
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2871
SonicParanoid 1 1.000 - - X4540
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1212.110

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