DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rsf1 and SRSF9

DIOPT Version :10

Sequence 1:NP_477001.2 Gene:Rsf1 / 34370 FlyBaseID:FBgn0011305 Length:200 Species:Drosophila melanogaster
Sequence 2:NP_003760.1 Gene:SRSF9 / 8683 HGNCID:10791 Length:221 Species:Homo sapiens


Alignment Length:238 Identity:69/238 - (28%)
Similarity:85/238 - (35%) Gaps:91/238 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSSMGDQRG----TRVYVGNLTDKVKKDDLEGEFTKYGKLNSVWIAFNPPG---FAFVEFEHRDD 58
            ||...|:||    .|:|||||...|::.|||..|.|||::..:.:. |..|   ||||.||...|
Human     1 MSGWADERGGEGDGRIYVGNLPTDVREKDLEDLFYKYGRIREIELK-NRHGLVPFAFVRFEDPRD 64

  Fly    59 AEKACDILNGSELLGSQLRVEISK------GRPRQGRRGGPMDRGGRRGDFGRHSITSGGSGGGG 117
            ||.|....||.:....:||||..:      |.||.||.|.|.    ||.||  ..:.||....|.
Human    65 AEDAIYGRNGYDYGQCRLRVEFPRTYGGRGGWPRGGRNGPPT----RRSDF--RVLVSGLPPSGS 123

  Fly   118 FRQ--------------------------------------------RGSSGSSS-------RHT 131
            ::.                                            |...|.:|       |.|
Human   124 WQDLKDHMREAGDVCYADVQKDGVGMVEYLRKEDMEYALRKLDDTKFRSHEGETSYIRVYPERST 188

  Fly   132 ERGYSSGRSGASSYNGREGGGSGFNRREVYGGGRDSSRYSSGS 174
            ..|||..|||:.                    ||||...|.||
Human   189 SYGYSRSRSGSR--------------------GRDSPYQSRGS 211

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rsf1NP_477001.2 RRM_SRSF3_like 11..82 CDD:409808 32/73 (44%)
SRSF9NP_003760.1 RRM1_SRSF9 15..86 CDD:241042 31/71 (44%)
RRM2_SRSF9 104..186 CDD:410161 11/87 (13%)
Interaction with SAFB1 188..200 7/11 (64%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 189..221 13/43 (30%)

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