Protein Alignment Rsf1 and SR34

DIOPT Version :10

• Sequence 1: NP_477001.2
• Gene: Rsf1 / 34370
• FlyBaseID: FBgn0011305
• Length: 200
• Species: Drosophila melanogaster
• Sequence 2: NP_850933.1
• Gene: SR34 / 839262
• AraportID: AT1G02840
• Length: 303
• Species: Arabidopsis thaliana
• Alignment Length: 246
• Identity: 73/246 - (29%)
• Similarity: 101/246 - (41%)
• Gaps: 69/246 - (28%)

  Fly     4 MGDQRGTRVYVGNLTDKVKKDDLEGEFTKYGKLNSVWIAF--NPPGFAFVEFEHRDDAEKACDIL 66
            |..:....||||||...:::.::|..|:|||.:..:.:..  .|||:|||||:...|||.|....
plant     1 MSSRSSRTVYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAEDAIHGR 65

  Fly    67 NGSELLGSQLRVEISKGRPRQGRRGGPMDRGGRRGDFGRHSITSGGSGGGGFRQRGSSGSSSRHT 131
            :|.:..|.:||||::.|    |||.....||         |...||.|||..|..|.|...||.:
plant    66 DGYDFDGHRLRVELAHG----GRRSSDDTRG---------SFNGGGRGGGRGRGDGGSRGPSRRS 117

  Fly   132 E-RGYSSGRSGASSYNG-----REGG--------------------------------------- 151
            | |...:|...::|:..     |:||
plant   118 EFRVLVTGLPSSASWQDLKDHMRKGGDVCFSQVYRDARGTTGVVDYTCYEDMKYALKKLDDTEFR 182

  Fly   152 ---GSGFNRREVYGGGRDS---SR---YSSGSSASYGRTGGQSAGRFRSRS 193
               .:|:.|...|...:||   ||   ||...|.|.||:..:|..|.||||
plant   183 NAFSNGYVRVREYDSRKDSRSPSRGRSYSKSRSRSRGRSVSRSRSRSRSRS 233

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rsf1	NP_477001.2	RRM_SRSF3_like	11..82	CDD:409808	29/72 (40%)
SR34	NP_850933.1	RRM1_SF2_plant_like	8..79	CDD:410011	28/70 (40%)
		RRM2_SF2_plant_like	119..194	CDD:410014	8/74 (11%)