Protein Alignment Rsf1 and SR30

DIOPT Version :10

• Sequence 1: NP_477001.2
• Gene: Rsf1 / 34370
• FlyBaseID: FBgn0011305
• Length: 200
• Species: Drosophila melanogaster
• Sequence 2: NP_172386.3
• Gene: SR30 / 837433
• AraportID: AT1G09140
• Length: 268
• Species: Arabidopsis thaliana
• Alignment Length: 237
• Identity: 66/237 - (27%)
• Similarity: 98/237 - (41%)
• Gaps: 55/237 - (23%)

  Fly     4 MGDQRGTRVYVGNLTDKVKKDDLEGEFTKYGKLNSVWIAF--NPPGFAFVEFEHRDDAEKACDIL 66
            |..:....:|||||...::|.::|..|.|||.:..:.:..  .|||:||||||...||:.|....
plant     1 MSSRWNRTIYVGNLPGDIRKCEVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDPRDADDAIYGR 65

  Fly    67 NGSELLGSQLRVEISKGRPRQGRRGGP-MDR----------GGRRGDFGRHSITSGGSGGGGFR- 119
            :|.:..|.:|||||:.|    |||..| :||          ..||.|:  ..:.:|......::
plant    66 DGYDFDGCRLRVEIAHG----GRRFSPSVDRYSSSYSASRAPSRRSDY--RVLVTGLPPSASWQD 124

  Fly   120 -------------------QRGSSG--SSSRHTERGYSSGRSGASSYNGREGGGSGFNR------ 157
                               ::|.||  ..|.:.:..|:..:..|:.:  |....|.:.|
plant   125 LKDHMRKAGDVCFSEVFPDRKGMSGVVDYSNYDDMKYAIRKLDATEF--RNAFSSAYIRVREYES 187

  Fly   158 REVYGGGRDSSRY-----SSGSSASYGRTGGQSAGRFRSRSP 194
            |.|.....||..|     |.|.|.||. :..:|....||.||
plant   188 RSVSRSPDDSKSYRSRSRSRGPSCSYS-SKSRSVSPARSISP 228

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rsf1	NP_477001.2	RRM_SRSF3_like	11..82	CDD:409808	30/72 (42%)
SR30	NP_172386.3	RRM_SF	8..79	CDD:473069	28/70 (40%)
		RRM2_SF2_plant_like	109..184	CDD:410014	10/78 (13%)