Protein Alignment Rsf1 and SR34b

DIOPT Version :10

• Sequence 1: NP_477001.2
• Gene: Rsf1 / 34370
• FlyBaseID: FBgn0011305
• Length: 200
• Species: Drosophila melanogaster
• Sequence 2: NP_001328194.1
• Gene: SR34b / 828027
• AraportID: AT4G02430
• Length: 292
• Species: Arabidopsis thaliana
• Alignment Length: 239
• Identity: 76/239 - (31%)
• Similarity: 102/239 - (42%)
• Gaps: 63/239 - (26%)

  Fly     4 MGDQRGTRVYVGNLTDKVKKDDLEGEFTKYGKLNSVWIAF--NPPGFAFVEFEHRDDAEKACDIL 66
            |..:....:|||||...:::.::|..|:|||.:..:.:..  .|||:||||||...||:.|....
plant     1 MSSRSSRTIYVGNLPGDIREREVEDLFSKYGPVVQIDLKIPPRPPGYAFVEFEDARDADDAIYGR 65

  Fly    67 NGSELLGSQLRVEISKGRPRQGRRGGPMDRG--GRRGDFGRHSITSGGSGGGGFRQRGSSGSSSR 129
            :|.:..|..||||::.|    |||.....||  ..||..||    .||.|||  |:||    .||
plant    66 DGYDFDGHHLRVELAHG----GRRSSHDARGSYSGRGRGGR----GGGDGGG--RERG----PSR 116

  Fly   130 HTE-RGYSSGRSGASSYNG-----REGG----------GSG------------------------ 154
            .:| |...||...::|:..     |:||          |.|
plant   117 RSEYRVVVSGLPSSASWQDLKDHMRKGGEVCFSQVFRDGRGTTGIVDYTSYEDMKYALDDTEFRN 181

  Fly   155 -----FNRREVYGGGRDSSRYSSGSSASYGRTGGQSAGRFRSRS 193
                 :.|...|...|||...|.|.|.|..|:.|:|..|.||||
plant   182 AFSHEYVRVREYDSRRDSRSPSRGRSYSKSRSRGRSPSRSRSRS 225

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rsf1	NP_477001.2	RRM_SRSF3_like	11..82	CDD:409808	28/72 (39%)
SR34b	NP_001328194.1	RRM1_SF2_plant_like	8..79	CDD:410011	27/70 (39%)
		RRM2_SF2_plant_like	120..192	CDD:410014	10/71 (14%)