Protein Alignment Rsf1 and AT3G47120

DIOPT Version :10

• Sequence 1: NP_477001.2
• Gene: Rsf1 / 34370
• FlyBaseID: FBgn0011305
• Length: 200
• Species: Drosophila melanogaster
• Sequence 2: NP_190296.1
• Gene: AT3G47120 / 823865
• AraportID: AT3G47120
• Length: 352
• Species: Arabidopsis thaliana
• Alignment Length: 229
• Identity: 56/229 - (24%)
• Similarity: 84/229 - (36%)
• Gaps: 60/229 - (26%)

  Fly    12 VYVGNLTDKVKKDDLEGEFTKYGKLNSVWI-----AFNPPGFAFVEFEHRDDAEKACDILNGSEL 71
            ||||.:...:.:.||...|::||::..|.:     .....||||:.:|.:.....|.|.|||:.:
plant    38 VYVGGIPFDLTEGDLLAVFSQYGEIVDVNLIRDKGTGKSKGFAFLAYEDQRSTILAVDNLNGALV 102

  Fly    72 LGSQLRV----------EISKGRPRQGRRGGPMDRGGRRGDFGR-------HSITSGGSGGGGFR 119
            ||..::|          |..:...||.|....:.|..:||:..|       |......:.|.|..
plant   103 LGRTIKVDHCGAYKKHEEEDEETRRQNREARGVCRAFQRGECTRGDSCKFSHDEKRAANTGWGHE 167

  Fly   120 ----------------------QRG--SSGSSSR--HTER-------GYSSGRSG---ASSYNGR 148
                                  |||  :.|.|.:  |.|:       |:...||.   ....||.
plant   168 EDRSSKWDHDKNREGRGVCRAFQRGECTRGDSCKFSHDEKRAATTGWGHEEDRSSKWDQDKLNGA 232

  Fly   149 EGGGSGFNRREVYGGGRDSSRY--SSGSSASYGR 180
            :.||:.|..|..:....:...|  .....|||||
plant   233 KKGGTSFGNRGDFKPDVEEKSYRGRGDGDASYGR 266

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rsf1	NP_477001.2	RRM_SRSF3_like	11..82	CDD:409808	24/84 (29%)
AT3G47120	NP_190296.1	RRM_ist3_like	27..115	CDD:409845	23/76 (30%)
		PABP-1234	38..>310	CDD:130689	56/229 (24%)