Protein Alignment Rsf1 and NUC-L2

DIOPT Version :10

• Sequence 1: NP_477001.2
• Gene: Rsf1 / 34370
• FlyBaseID: FBgn0011305
• Length: 200
• Species: Drosophila melanogaster
• Sequence 2: NP_188491.1
• Gene: NUC-L2 / 821392
• AraportID: AT3G18610
• Length: 636
• Species: Arabidopsis thaliana
• Alignment Length: 237
• Identity: 60/237 - (25%)
• Similarity: 98/237 - (41%)
• Gaps: 62/237 - (26%)

  Fly     7 QRGTR-VYVGNLTDKVKKDDLEGEFTKYGKLNSVWI-AFNP---PGFAFVEFEHRDDAEKACDIL 66
            |.|:: ::.|||:.::.:.|:|..|.:.|::..|.: :|:.   .|:..:||...::|:||.: :
plant   380 QGGSKTLFAGNLSYQIARSDIENFFKEAGEVVDVRLSSFDDGSFKGYGHIEFASPEEAQKALE-M 443

  Fly    67 NGSELLGSQLRVEIS--KGRPRQGRRGGPMDRGGRRGDFGRHSITSGGSGGGGFRQRGSSGS--- 126
            ||..|||..:|::::  :|.||.       ...||:|:         ||.......||.|.|
plant   444 NGKLLLGRDVRLDLANERGTPRN-------SNPGRKGE---------GSQSRTIYVRGFSSSLGE 492

  Fly   127 -----------------------SSRHT--ERGY-----SSGRSGASSYNGREGGGSGFNRREVY 161
                                   :.|.|  .||:     :||...|...:|.|.||...:..|..
plant   493 DEIKKELRSHFSKCGEVTRVHVPTDRETGASRGFAYIDLTSGFDEALQLSGSEIGGGNIHVEESR 557

  Fly   162 GGGRDSSRYSSGSSASYGRTGGQS-----AGRFRSRSPVGNH 198
            ....|..|.|:.:.|.....|..|     .|||..|:|.|.|
plant   558 PRDSDEGRSSNRAPARGAPRGRHSDRAPRGGRFSDRAPRGRH 599

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rsf1	NP_477001.2	RRM_SRSF3_like	11..82	CDD:409808	21/77 (27%)
NUC-L2	NP_188491.1	RRM1_NUCLs	385..461	CDD:409884	21/76 (28%)
		RRM2_NUCLs	480..556	CDD:409885	15/75 (20%)