DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rsf1 and RS2Z33

DIOPT Version :10

Sequence 1:NP_477001.2 Gene:Rsf1 / 34370 FlyBaseID:FBgn0011305 Length:200 Species:Drosophila melanogaster
Sequence 2:NP_850280.1 Gene:RS2Z33 / 818311 AraportID:AT2G37340 Length:290 Species:Arabidopsis thaliana


Alignment Length:214 Identity:37/214 - (17%)
Similarity:75/214 - (35%) Gaps:77/214 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    93 PRVPIQEGMGFYGIDNPNVVNDL----THKLWPQG------NIFVGKNVQSFAEKLIELNLTVRT 147
            ||.|:.  :.:..:|:|:.|..|    ..:.||..      :..:..|::.:..:.::|:.::..
plant   810 PRPPLP--LSYTPLDSPSDVLPLPGEGCFQPWPYPLSSCWLHSELKMNLEPYKRESLQLSSSLTP 872

  Fly   148 MTLESFGLEKYMEEHLNAANKHFQLLKYKGISDDNTENKIGFYPHIDRHFLTILCQNDAVDGLEI 212
            ..|.|.   ::..||.:...:...|         ...||:|..|.|.:                 
plant   873 ERLRSL---QFCSEHESEKQQQVPL---------QVINKVGIVPPITK----------------- 908

  Fly   213 KTKDGEEWIKVKPSQASSFIVMAGASLHVLLNGGVFPPLHRVVITGKKDRYVAALFTIPKEGVII 277
              ...|:..::|||     :|....|.  ..||.:           .::|..:|||         
plant   909 --SHNEDESEMKPS-----VVRREGSR--TPNGNI-----------SRERPKSALF--------- 944

  Fly   278 NAPEEM-----VDDEHPRL 291
              |.|:     |::::.|:
plant   945 --PSEVKSKMSVEEQNDRM 961

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rsf1NP_477001.2 RRM_SRSF3_like 11..82 CDD:409808
RS2Z33NP_850280.1 RRM_SF 12..81 CDD:473069
PTZ00368 <86..144 CDD:173561
Blue background indicates that the domain is not in the aligned region.

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