Protein Alignment Rsf1 and Cirbp

DIOPT Version :10

• Sequence 1: NP_477001.2
• Gene: Rsf1 / 34370
• FlyBaseID: FBgn0011305
• Length: 200
• Species: Drosophila melanogaster
• Sequence 2: XP_038935873.1
• Gene: Cirbp / 81825
• RGDID: 620756
• Length: 176
• Species: Rattus norvegicus
• Alignment Length: 203
• Identity: 65/203 - (32%)
• Similarity: 90/203 - (44%)
• Gaps: 48/203 - (23%)

  Fly     4 MGDQRGTRVYVGNLTDKVKKDDLEGEFTKYGKLNSVWIAFN-----PPGFAFVEFEHRDDAEKAC 63
            |....| :::||.|:....:..||..|:|||:::.|.:..:     ..||.||.||:.|||:.|.
  Rat     1 MASDEG-KLFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAM 64

  Fly    64 DILNGSELLGSQLRVEISKGRPRQGRRGGPMDRGGRRGDFGRHSITSGGSGGGGFRQRGSSGSSS 128
            ..:||..:.|.|:||: ..|:....|..|  .|||..|  ||.....|.|.|.||.:.|.
  Rat    65 MAMNGKSVDGRQIRVD-QAGKSSDNRSRG--YRGGSAG--GRGFFRGGRSRGRGFSRGGG----- 119

  Fly   129 RHTERGYSSGRSGASSYNGREGGGSGFNRREVYGGGRD--SSRYSSGSSA-------------SY 178
               :|||..||     :..|.||         |||.||  :||...||..             ||
  Rat   120 ---DRGYGGGR-----FESRSGG---------YGGSRDYYASRSQGGSYGYRSSGGSYRDSYDSY 167

  Fly   179 GRTGGQSA 186
            |::|.:.|
  Rat   168 GKSGSKGA 175

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rsf1	NP_477001.2	RRM_SRSF3_like	11..82	CDD:409808	26/75 (35%)
Cirbp	XP_038935873.1	RRM_CIRBP_RBM3	6..85	CDD:409883	28/80 (35%)