DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rsf1 and TIA1

DIOPT Version :10

Sequence 1:NP_477001.2 Gene:Rsf1 / 34370 FlyBaseID:FBgn0011305 Length:200 Species:Drosophila melanogaster
Sequence 2:NP_071505.2 Gene:TIA1 / 7072 HGNCID:11802 Length:386 Species:Homo sapiens


Alignment Length:90 Identity:23/90 - (25%)
Similarity:46/90 - (51%) Gaps:5/90 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSSMGDQRGTRVYVGNLTDKVKKDDLEGEFTKYGKLNSVWIAFN-----PPGFAFVEFEHRDDAE 60
            :|:...|....|:||:|:.::..:|::..|..:|:::...:..:     ..|:.||.|.::.|||
Human    97 VSTQRSQDHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAE 161

  Fly    61 KACDILNGSELLGSQLRVEISKGRP 85
            .|...:.|..|.|.|:|...:..:|
Human   162 NAIQQMGGQWLGGRQIRTNWATRKP 186

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rsf1NP_477001.2 RRM_SRSF3_like 11..82 CDD:409808 20/75 (27%)
TIA1NP_071505.2 RRM1_TIA1 8..81 CDD:410027
RRM2_TIA1 104..181 CDD:410030 20/76 (26%)
RRM3_TIAR 214..286 CDD:241064
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 354..386
Blue background indicates that the domain is not in the aligned region.

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