Protein Alignment Rsf1 and cirbpb

DIOPT Version :9

• Sequence 1: NP_001260318.1
• Gene: Rsf1 / 34370
• FlyBaseID: FBgn0011305
• Length: 200
• Species: Drosophila melanogaster
• Sequence 2: NP_001035411.2
• Gene: cirbpb / 678563
• ZFINID: ZDB-GENE-030131-5841
• Length: 206
• Species: Danio rerio
• Alignment Length: 196
• Identity: 71/196 - (36%)
• Similarity: 92/196 - (46%)
• Gaps: 29/196 - (14%)

  Fly     1 MSSMGDQRGTRVYVGNLTDKVKKDDLEGEFTKYGKLNSVWI-----AFNPPGFAFVEFEHRDDAE 60
            ||..|     ::::|.|:....:..||..|:|||.:..|.:     .....||.||.||:.:||:
Zfish     1 MSDEG-----KLFIGGLSYDTTEQSLEEAFSKYGTIAKVDVIRDRETDRSRGFGFVTFENPEDAK 60

  Fly    61 KACDILNGSELLGSQLRV-EISKGRPRQGR-RGGPMDRGGRRGDFGRHSITSGGSGGGGFRQRGS 123
            .|...:||.::.|..:|| |..|...|.|. |||  .|||.|| |.|.|...||.|.||.|..||
Zfish    61 DAMAAMNGKQVDGRMIRVDEAGKSGGRSGGFRGG--SRGGGRG-FFRGSRGRGGGGYGGDRSYGS 122

  Fly   124 SGSSSRHTERGYSSGRS--GASSYNGREGGGSGFNRREVYGGGRDSSRYSSGSSASYGRTGGQSA 186
                    :|.:...||  |..||.|.:.|..|..|.  ||||..|  |..|......|:||.|:
Zfish   123 --------DRSFGGDRSYGGDRSYGGGDRGYGGGERS--YGGGDRS--YGGGGGGYSNRSGGYSS 175

  Fly   187 G 187
            |
Zfish   176 G 176

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rsf1	NP_001260318.1	RRM_SRSF3_like	11..82	CDD:409808	24/76 (32%)
cirbpb	NP_001035411.2	RRM	<2..>81	CDD:223796	25/83 (30%)
		RRM_SF	5..83	CDD:302621	25/82 (30%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	1	0.960	-	-
ZFIN	0	0.000	Not matched by this tool.
	2	1.870