DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rsf1 and SRSF6

DIOPT Version :10

Sequence 1:NP_477001.2 Gene:Rsf1 / 34370 FlyBaseID:FBgn0011305 Length:200 Species:Drosophila melanogaster
Sequence 2:NP_006266.2 Gene:SRSF6 / 6431 HGNCID:10788 Length:344 Species:Homo sapiens


Alignment Length:247 Identity:72/247 - (29%)
Similarity:95/247 - (38%) Gaps:83/247 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 RVYVGNLTDKVKKDDLEGEFTKYGKLNSVWIAFNPPGFAFVEFEHRDDAEKACDILNGSELLGSQ 75
            |||:|.|:..|::.|::..|:.||:|..|.:   ..|:.|||||...||:.|...|||.||.|.:
Human     3 RVYIGRLSYNVREKDIQRFFSGYGRLLEVDL---KNGYGFVEFEDSRDADDAVYELNGKELCGER 64

  Fly    76 LRVEISKGRPRQGRRGGPMDRGGRRGDFGRHSITSGGSGGGGFRQRGSSGS-------------- 126
            :.||.::| ||:.|.|  ...|.|             |||||:..|.:||.              
Human    65 VIVEHARG-PRRDRDG--YSYGSR-------------SGGGGYSSRRTSGRDKYGPPVRTEYRLI 113

  Fly   127 ----SSR---------------------HTE---------RGYSSGRSGASSYNGREGGGSGF-- 155
                |||                     |.|         |.||..:......:|.|..|...  
Human   114 VENLSSRCSWQDLKDFMRQAGEVTYADAHKERTNEGVIEFRSYSDMKRALDKLDGTEINGRNIRL 178

  Fly   156 -------NRREVYGGGRDSSR-------YSSGSSASYGRTGGQSAGRFRSRS 193
                   :.|..|.|.|..||       .|..||.|..|:..:|..|.||||
Human   179 IEDKPRTSHRRSYSGSRSRSRSRRRSRSRSRRSSRSRSRSISKSRSRSRSRS 230

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rsf1NP_477001.2 RRM_SRSF3_like 11..82 CDD:409808 29/70 (41%)
SRSF6NP_006266.2 RRM1_SRSF6 1..72 CDD:410009 29/71 (41%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 75..103 12/42 (29%)
RRM2_SRSF6 110..182 CDD:410159 11/71 (15%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 176..344 17/55 (31%)

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