DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rsf1 and SRSF4

DIOPT Version :10

Sequence 1:NP_477001.2 Gene:Rsf1 / 34370 FlyBaseID:FBgn0011305 Length:200 Species:Drosophila melanogaster
Sequence 2:NP_005617.2 Gene:SRSF4 / 6429 HGNCID:10786 Length:494 Species:Homo sapiens


Alignment Length:246 Identity:65/246 - (26%)
Similarity:88/246 - (35%) Gaps:75/246 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 RVYVGNLTDKVKKDDLEGEFTKYGKLNSVWIAFNPPGFAFVEFEHRDDAEKACDILNGSELLGSQ 75
            |||:|.|:.:.::.|:|..|..|||:..|.:   ..|:.||||:...||:.|...|||.:|.|.:
Human     3 RVYIGRLSYQARERDVERFFKGYGKILEVDL---KNGYGFVEFDDLRDADDAVYELNGKDLCGER 64

  Fly    76 LRVEISKGRPRQGRRGGPMDRGGRRGDFGRHSITSGGSGGGG----------------------- 117
            :.||.::|..|.|..|     .||.|...|.|    |....|                       
Human    65 VIVEHARGPRRDGSYG-----SGRSGYGYRRS----GRDKYGPPTRTEYRLIVENLSSRCSWQDL 120

  Fly   118 ---FRQRGSSGSSSRHTER---------GYSSGRSGASSYNGREGGG---------SGFNRREVY 161
               .||.|....:..|..|         .||..:......:|.|..|         .|..||..|
Human   121 KDYMRQAGEVTYADAHKGRKNEGVIEFVSYSDMKRALEKLDGTEVNGRKIRLVEDKPGSRRRRSY 185

  Fly   162 GGGRD-------------------SSRYSSGSSASYGRTGGQSAGRFRSRS 193
            ...|.                   ||:.|...|.|..|:|.:|..:.||||
Human   186 SRSRSHSRSRSRSRHSRKSRSRSGSSKSSHSKSRSRSRSGSRSRSKSRSRS 236

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rsf1NP_477001.2 RRM_SRSF3_like 11..82 CDD:409808 27/70 (39%)
SRSF4NP_005617.2 RRM1_SRSF4 1..87 CDD:410007 34/91 (37%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 72..95 10/31 (32%)
RRM2_SRSF4_like 104..175 CDD:410012 10/70 (14%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 169..494 17/68 (25%)

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