Protein Alignment Rsf1 and SC35

DIOPT Version :9

• Sequence 1: NP_001260318.1
• Gene: Rsf1 / 34370
• FlyBaseID: FBgn0011305
• Length: 200
• Species: Drosophila melanogaster
• Sequence 2: NP_001188794.1
• Gene: SC35 / 53444
• FlyBaseID: FBgn0265298
• Length: 195
• Species: Drosophila melanogaster
• Alignment Length: 191
• Identity: 65/191 - (34%)
• Similarity: 85/191 - (44%)
• Gaps: 33/191 - (17%)

  Fly    14 VGNLTDKVKKDDLEGEFTKYGKLNSVWI-----AFNPPGFAFVEFEHRDDAEKACDILNGSELLG 73
            |.|||.:...:||...|.:.|::..::|     .....|||||.|..:.|||.|.:.::|..|.|
  Fly    27 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYDKRDAEDALEAMDGRMLDG 91

  Fly    74 SQLRVEISK-GRPRQGRRGGPMDRGGRRGDFGRHSITSGGSGGGGFRQRGSSGSSSRH-----TE 132
            .:|||:::: |||....|..    .||||        .||.||.|.|:|..|.|..|.     ..
  Fly    92 RELRVQMARYGRPSSPTRSS----SGRRG--------GGGGGGSGGRRRSRSRSPMRRRSRSPRR 144

  Fly   133 RGYSSGRSGASSYNGREGGGSGFNRREVYGGGRDSSRYSSGSSASYGRTGGQSAGRFRSRS 193
            |.||..||..|....|.   |.|:|..|.|..|:.....||..|       .:|.|.||||
  Fly   145 RSYSRSRSPGSHSPERR---SKFSRSPVRGDSRNGIGSGSGGLA-------PAASRSRSRS 195

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rsf1	NP_001260318.1	RRM_SRSF3_like	11..82	CDD:409808	25/72 (35%)
SC35	NP_001188794.1	RRM	<24..>100	CDD:223796	25/72 (35%)
		RRM_SRSF2_SRSF8	25..97	CDD:240757	24/69 (35%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1533297at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	P	PTHR23147
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	2	2.110